Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vrk1Q80X41 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Gm14193-201ENSMUST00000105067 153 ntBASIC11.34□□□□□ -0.59
Vrk1Q80X41 Gm15610-201ENSMUST00000120584 195 ntBASIC11.34□□□□□ -0.59
Vrk1Q80X41 Gm8737-201ENSMUST00000122208 642 ntBASIC11.34□□□□□ -0.59
Vrk1Q80X41 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Gm23771-201ENSMUST00000178702 110 ntBASIC11.34□□□□□ -0.59
Vrk1Q80X41 Gm29499-201ENSMUST00000189151 486 ntBASIC11.34□□□□□ -0.59
Vrk1Q80X41 Gm28329-201ENSMUST00000191208 689 ntBASIC11.34□□□□□ -0.59
Vrk1Q80X41 Gm29171-201ENSMUST00000191397 486 ntBASIC11.34□□□□□ -0.59
Vrk1Q80X41 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.34□□□□□ -0.59
Vrk1Q80X41 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.34□□□□□ -0.59
Vrk1Q80X41 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vrk1Q80X41 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.34□□□□□ -0.59
Vrk1Q80X41 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vrk1Q80X41 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Vrk1Q80X41 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.33□□□□□ -0.59
Vrk1Q80X41 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vrk1Q80X41 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vrk1Q80X41 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vrk1Q80X41 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vrk1Q80X41 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vrk1Q80X41 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vrk1Q80X41 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.33□□□□□ -0.6
Vrk1Q80X41 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vrk1Q80X41 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vrk1Q80X41 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vrk1Q80X41 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vrk1Q80X41 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vrk1Q80X41 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vrk1Q80X41 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.33□□□□□ -0.6
Vrk1Q80X41 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Vrk1Q80X41 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.33□□□□□ -0.6
Vrk1Q80X41 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.33□□□□□ -0.6
Vrk1Q80X41 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vrk1Q80X41 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vrk1Q80X41 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vrk1Q80X41 Gm23045-201ENSMUST00000175041 96 ntBASIC11.33□□□□□ -0.6
Vrk1Q80X41 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Vrk1Q80X41 Gm27910-201ENSMUST00000185004 107 ntBASIC11.33□□□□□ -0.6
Vrk1Q80X41 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC11.33□□□□□ -0.6
Vrk1Q80X41 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vrk1Q80X41 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.33□□□□□ -0.6
Vrk1Q80X41 Gm2553-201ENSMUST00000215986 605 ntBASIC11.33□□□□□ -0.6
Vrk1Q80X41 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.33□□□□□ -0.6
Vrk1Q80X41 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.33□□□□□ -0.6
Vrk1Q80X41 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vrk1Q80X41 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vrk1Q80X41 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vrk1Q80X41 Cog3-203ENSMUST00000227473 4197 ntBASIC11.33□□□□□ -0.6
Vrk1Q80X41 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vrk1Q80X41 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.33□□□□□ -0.6
Vrk1Q80X41 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Vrk1Q80X41 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vrk1Q80X41 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vrk1Q80X41 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Vrk1Q80X41 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Vrk1Q80X41 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vrk1Q80X41 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.33□□□□□ -0.6
Vrk1Q80X41 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vrk1Q80X41 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vrk1Q80X41 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Vrk1Q80X41 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.33□□□□□ -0.6
Vrk1Q80X41 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Vrk1Q80X41 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Vrk1Q80X41 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vrk1Q80X41 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Vrk1Q80X41 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vrk1Q80X41 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms