Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rpp38Q80UU2 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpp38Q80UU2 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpp38Q80UU2 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.82□□□□□ -0.52
Rpp38Q80UU2 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Rpp38Q80UU2 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpp38Q80UU2 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rpp38Q80UU2 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpp38Q80UU2 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpp38Q80UU2 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpp38Q80UU2 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rpp38Q80UU2 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpp38Q80UU2 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.82□□□□□ -0.52
Rpp38Q80UU2 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rpp38Q80UU2 Gm25881-201ENSMUST00000157783 103 ntBASIC11.82□□□□□ -0.52
Rpp38Q80UU2 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rpp38Q80UU2 Gm7940-201ENSMUST00000218195 769 ntBASIC11.82□□□□□ -0.52
Rpp38Q80UU2 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.82□□□□□ -0.52
Rpp38Q80UU2 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpp38Q80UU2 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpp38Q80UU2 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Rpp38Q80UU2 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Rpp38Q80UU2 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpp38Q80UU2 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpp38Q80UU2 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Rpp38Q80UU2 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpp38Q80UU2 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rpp38Q80UU2 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.82□□□□□ -0.52
Rpp38Q80UU2 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Rpp38Q80UU2 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpp38Q80UU2 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Gm12266-201ENSMUST00000120311 962 ntBASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Gm17040-202ENSMUST00000170597 889 ntBASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Gm2383-201ENSMUST00000181461 807 ntBASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Gm27530-201ENSMUST00000184096 98 ntBASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Gm2965-201ENSMUST00000198365 343 ntBASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Gm6867-201ENSMUST00000219165 425 ntBASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.81□□□□□ -0.52
Rpp38Q80UU2 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.81□□□□□ -0.52
Rpp38Q80UU2 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Rpp38Q80UU2 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpp38Q80UU2 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.81□□□□□ -0.52
Rpp38Q80UU2 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rpp38Q80UU2 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpp38Q80UU2 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rpp38Q80UU2 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rpp38Q80UU2 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.8□□□□□ -0.52
Rpp38Q80UU2 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpp38Q80UU2 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpp38Q80UU2 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rpp38Q80UU2 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Rpp38Q80UU2 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.8□□□□□ -0.52
Rpp38Q80UU2 Gm11439-201ENSMUST00000118598 409 ntBASIC11.8□□□□□ -0.52
Rpp38Q80UU2 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.8□□□□□ -0.52
Rpp38Q80UU2 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rpp38Q80UU2 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rpp38Q80UU2 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Rpp38Q80UU2 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Rpp38Q80UU2 Gm8100-201ENSMUST00000182906 988 ntBASIC11.8□□□□□ -0.52
Rpp38Q80UU2 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpp38Q80UU2 Gm5714-201ENSMUST00000197343 566 ntBASIC11.8□□□□□ -0.52
Rpp38Q80UU2 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.8□□□□□ -0.52
Rpp38Q80UU2 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.8□□□□□ -0.52
Rpp38Q80UU2 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms