Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Psmd10-201ENSMUST00000033805 1430 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pif1Q80SX8 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.06□□□□□ -0.64
Pif1Q80SX8 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.06□□□□□ -0.64
Pif1Q80SX8 Gm5778-201ENSMUST00000171003 1072 ntBASIC11.06□□□□□ -0.64
Pif1Q80SX8 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Gm8365-201ENSMUST00000197334 648 ntBASIC11.06□□□□□ -0.64
Pif1Q80SX8 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Gm45398-201ENSMUST00000210561 165 ntBASIC11.06□□□□□ -0.64
Pif1Q80SX8 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.06□□□□□ -0.64
Pif1Q80SX8 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pif1Q80SX8 Gm45165-201ENSMUST00000207763 1631 ntBASIC11.06□□□□□ -0.64
Pif1Q80SX8 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pif1Q80SX8 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Pif1Q80SX8 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pif1Q80SX8 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pif1Q80SX8 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Pif1Q80SX8 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pif1Q80SX8 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pif1Q80SX8 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pif1Q80SX8 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.05□□□□□ -0.64
Pif1Q80SX8 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pif1Q80SX8 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pif1Q80SX8 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pif1Q80SX8 Gm44914-201ENSMUST00000207191 2720 ntBASIC11.05□□□□□ -0.64
Pif1Q80SX8 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pif1Q80SX8 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pif1Q80SX8 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pif1Q80SX8 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pif1Q80SX8 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Pif1Q80SX8 Gm11663-201ENSMUST00000117888 290 ntBASIC11.05□□□□□ -0.64
Pif1Q80SX8 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC11.05□□□□□ -0.64
Pif1Q80SX8 Gm8194-201ENSMUST00000159783 859 ntBASIC11.05□□□□□ -0.64
Pif1Q80SX8 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pif1Q80SX8 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.05□□□□□ -0.64
Pif1Q80SX8 Gm9540-201ENSMUST00000188230 478 ntBASIC11.05□□□□□ -0.64
Pif1Q80SX8 Gm8956-201ENSMUST00000203939 825 ntBASIC11.05□□□□□ -0.64
Pif1Q80SX8 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pif1Q80SX8 Gm9797-202ENSMUST00000218003 294 ntBASIC11.05□□□□□ -0.64
Pif1Q80SX8 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.05□□□□□ -0.64
Pif1Q80SX8 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms