Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 Gm8566-201ENSMUST00000120174 465 ntBASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 Gm11660-201ENSMUST00000120955 412 ntBASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 Gm45770-201ENSMUST00000212105 616 ntBASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh8Q7TSK3 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh8Q7TSK3 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh8Q7TSK3 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.71□□□□□ -0.54
Pcdh8Q7TSK3 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Pcdh8Q7TSK3 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh8Q7TSK3 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Pcdh8Q7TSK3 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh8Q7TSK3 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.71□□□□□ -0.54
Pcdh8Q7TSK3 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Gm5419-201ENSMUST00000119301 527 ntBASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Gm14247-201ENSMUST00000120950 237 ntBASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Gm13461-201ENSMUST00000120980 662 ntBASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Gm7467-201ENSMUST00000185173 652 ntBASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh8Q7TSK3 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Pcdh8Q7TSK3 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms