Protein–RNA interactions for Protein: Q78WZ7

Twistnb, DNA-directed RNA polymerase I subunit RPA43, mousemouse

Known RBP Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TwistnbQ78WZ7 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.03□□□□□ -0.48
TwistnbQ78WZ7 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TwistnbQ78WZ7 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TwistnbQ78WZ7 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TwistnbQ78WZ7 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TwistnbQ78WZ7 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TwistnbQ78WZ7 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
TwistnbQ78WZ7 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
TwistnbQ78WZ7 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
TwistnbQ78WZ7 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TwistnbQ78WZ7 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TwistnbQ78WZ7 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
TwistnbQ78WZ7 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TwistnbQ78WZ7 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
TwistnbQ78WZ7 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
TwistnbQ78WZ7 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.02□□□□□ -0.48
TwistnbQ78WZ7 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
TwistnbQ78WZ7 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
TwistnbQ78WZ7 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
TwistnbQ78WZ7 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
TwistnbQ78WZ7 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
TwistnbQ78WZ7 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
TwistnbQ78WZ7 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
TwistnbQ78WZ7 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TwistnbQ78WZ7 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
TwistnbQ78WZ7 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TwistnbQ78WZ7 Rprl1-201ENSMUST00000158050 327 ntBASIC12.02□□□□□ -0.49
TwistnbQ78WZ7 Gm8738-201ENSMUST00000172606 329 ntBASIC12.02□□□□□ -0.49
TwistnbQ78WZ7 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TwistnbQ78WZ7 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.02□□□□□ -0.49
TwistnbQ78WZ7 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.02□□□□□ -0.49
TwistnbQ78WZ7 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.02□□□□□ -0.49
TwistnbQ78WZ7 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TwistnbQ78WZ7 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TwistnbQ78WZ7 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TwistnbQ78WZ7 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TwistnbQ78WZ7 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TwistnbQ78WZ7 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
TwistnbQ78WZ7 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TwistnbQ78WZ7 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TwistnbQ78WZ7 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TwistnbQ78WZ7 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TwistnbQ78WZ7 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
TwistnbQ78WZ7 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TwistnbQ78WZ7 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
TwistnbQ78WZ7 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TwistnbQ78WZ7 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.02□□□□□ -0.49
TwistnbQ78WZ7 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.02□□□□□ -0.49
TwistnbQ78WZ7 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TwistnbQ78WZ7 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TwistnbQ78WZ7 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
TwistnbQ78WZ7 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TwistnbQ78WZ7 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
TwistnbQ78WZ7 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
TwistnbQ78WZ7 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
TwistnbQ78WZ7 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TwistnbQ78WZ7 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TwistnbQ78WZ7 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TwistnbQ78WZ7 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TwistnbQ78WZ7 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
TwistnbQ78WZ7 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
TwistnbQ78WZ7 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TwistnbQ78WZ7 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
TwistnbQ78WZ7 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC12.01□□□□□ -0.49
TwistnbQ78WZ7 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.01□□□□□ -0.49
TwistnbQ78WZ7 Gm11700-201ENSMUST00000119409 403 ntBASIC12.01□□□□□ -0.49
TwistnbQ78WZ7 Gm14999-201ENSMUST00000121039 624 ntBASIC12.01□□□□□ -0.49
TwistnbQ78WZ7 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.01□□□□□ -0.49
TwistnbQ78WZ7 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TwistnbQ78WZ7 Gm18711-201ENSMUST00000199341 750 ntBASIC12.01□□□□□ -0.49
TwistnbQ78WZ7 Gm45384-201ENSMUST00000210451 277 ntBASIC12.01□□□□□ -0.49
TwistnbQ78WZ7 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.01□□□□□ -0.49
TwistnbQ78WZ7 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.01□□□□□ -0.49
TwistnbQ78WZ7 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
TwistnbQ78WZ7 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.01□□□□□ -0.49
TwistnbQ78WZ7 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TwistnbQ78WZ7 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TwistnbQ78WZ7 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TwistnbQ78WZ7 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.01□□□□□ -0.49
TwistnbQ78WZ7 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
TwistnbQ78WZ7 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TwistnbQ78WZ7 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TwistnbQ78WZ7 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TwistnbQ78WZ7 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TwistnbQ78WZ7 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12□□□□□ -0.49
TwistnbQ78WZ7 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TwistnbQ78WZ7 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
TwistnbQ78WZ7 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TwistnbQ78WZ7 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12□□□□□ -0.49
TwistnbQ78WZ7 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12□□□□□ -0.49
TwistnbQ78WZ7 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
TwistnbQ78WZ7 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
TwistnbQ78WZ7 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
TwistnbQ78WZ7 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12□□□□□ -0.49
TwistnbQ78WZ7 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TwistnbQ78WZ7 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TwistnbQ78WZ7 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
TwistnbQ78WZ7 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
TwistnbQ78WZ7 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12□□□□□ -0.49
TwistnbQ78WZ7 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms