Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Gm17230-201ENSMUST00000171194 3942 ntBASIC9.62□□□□□ -0.87
Vma21Q78T54 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Vma21Q78T54 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Vma21Q78T54 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Vma21Q78T54 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Vma21Q78T54 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Vma21Q78T54 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Vma21Q78T54 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC9.62□□□□□ -0.87
Vma21Q78T54 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC9.61□□□□□ -0.87
Vma21Q78T54 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC9.61□□□□□ -0.87
Vma21Q78T54 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Vma21Q78T54 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
Vma21Q78T54 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Gm11700-201ENSMUST00000119409 403 ntBASIC9.61□□□□□ -0.87
Vma21Q78T54 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Gm24845-201ENSMUST00000158034 109 ntBASIC9.61□□□□□ -0.87
Vma21Q78T54 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC9.61□□□□□ -0.87
Vma21Q78T54 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC9.61□□□□□ -0.87
Vma21Q78T54 Gm27514-201ENSMUST00000183692 110 ntBASIC9.61□□□□□ -0.87
Vma21Q78T54 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
Vma21Q78T54 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC9.61□□□□□ -0.87
Vma21Q78T54 Gm43133-201ENSMUST00000197472 463 ntBASIC9.61□□□□□ -0.87
Vma21Q78T54 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Vma21Q78T54 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Vma21Q78T54 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC9.61□□□□□ -0.87
Vma21Q78T54 AC154252.2-201ENSMUST00000223593 767 ntBASIC9.61□□□□□ -0.87
Vma21Q78T54 AC140406.1-201ENSMUST00000226481 465 ntBASIC9.61□□□□□ -0.87
Vma21Q78T54 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC9.61□□□□□ -0.87
Vma21Q78T54 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Vma21Q78T54 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Vma21Q78T54 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Vma21Q78T54 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Vma21Q78T54 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC9.61□□□□□ -0.87
Vma21Q78T54 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
Vma21Q78T54 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Vma21Q78T54 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Vma21Q78T54 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Vma21Q78T54 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Vma21Q78T54 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Vma21Q78T54 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC9.6□□□□□ -0.87
Vma21Q78T54 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Vma21Q78T54 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Vma21Q78T54 AC167022.1-201ENSMUST00000218647 1458 ntBASIC9.6□□□□□ -0.87
Vma21Q78T54 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Vma21Q78T54 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Vma21Q78T54 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC9.6□□□□□ -0.87
Vma21Q78T54 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC9.6□□□□□ -0.87
Vma21Q78T54 Gm4780-202ENSMUST00000215200 2644 ntBASIC9.6□□□□□ -0.87
Vma21Q78T54 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC9.6□□□□□ -0.87
Vma21Q78T54 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC9.6□□□□□ -0.87
Vma21Q78T54 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Vma21Q78T54 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Vma21Q78T54 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Vma21Q78T54 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Vma21Q78T54 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Vma21Q78T54 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Vma21Q78T54 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Vma21Q78T54 Gm2128-201ENSMUST00000108009 2560 ntBASIC9.6□□□□□ -0.87
Vma21Q78T54 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms