Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Gm11960-201ENSMUST00000122068 925 ntBASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Gm38266-201ENSMUST00000194931 421 ntBASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Gm43962-201ENSMUST00000203898 190 ntBASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ssx9Q6XAS3 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Gm38314-201ENSMUST00000195709 625 ntBASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ssx9Q6XAS3 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.74□□□□□ -0.53
Ssx9Q6XAS3 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Ssx9Q6XAS3 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Ssx9Q6XAS3 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssx9Q6XAS3 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ssx9Q6XAS3 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssx9Q6XAS3 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssx9Q6XAS3 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Ssx9Q6XAS3 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssx9Q6XAS3 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssx9Q6XAS3 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssx9Q6XAS3 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssx9Q6XAS3 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssx9Q6XAS3 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Ssx9Q6XAS3 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms