Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rif1Q6PR54 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rif1Q6PR54 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC10.04□□□□□ -0.8
Rif1Q6PR54 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rif1Q6PR54 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rif1Q6PR54 AC022682.1-201ENSMUST00000224624 2023 ntBASIC10.04□□□□□ -0.8
Rif1Q6PR54 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Gm11244-201ENSMUST00000121243 237 ntBASIC10.04□□□□□ -0.8
Rif1Q6PR54 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Rif1Q6PR54 AC192333.3-201ENSMUST00000224041 463 ntBASIC10.04□□□□□ -0.8
Rif1Q6PR54 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rif1Q6PR54 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC10.03□□□□□ -0.8
Rif1Q6PR54 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Rif1Q6PR54 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Mir704-201ENSMUST00000102106 77 ntBASIC10.03□□□□□ -0.8
Rif1Q6PR54 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC10.03□□□□□ -0.8
Rif1Q6PR54 AC154433.1-201ENSMUST00000224401 1183 ntBASIC10.03□□□□□ -0.8
Rif1Q6PR54 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Gm5705-201ENSMUST00000066241 711 ntBASIC10.03□□□□□ -0.8
Rif1Q6PR54 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rif1Q6PR54 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rif1Q6PR54 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Mir6359-201ENSMUST00000183668 81 ntBASIC10.03□□□□□ -0.8
Rif1Q6PR54 Rce1-203ENSMUST00000224707 1255 ntBASIC10.03□□□□□ -0.8
Rif1Q6PR54 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rif1Q6PR54 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Rif1Q6PR54 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Rif1Q6PR54 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Rif1Q6PR54 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
Rif1Q6PR54 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Rif1Q6PR54 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Rif1Q6PR54 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
Rif1Q6PR54 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC10.02□□□□□ -0.8
Rif1Q6PR54 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
Rif1Q6PR54 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Rif1Q6PR54 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
Rif1Q6PR54 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms