Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Gm2546-201ENSMUST00000182630 991 ntBASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scaf4Q6PFF0 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Gm12390-201ENSMUST00000117897 397 ntBASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Gm807-202ENSMUST00000224929 408 ntBASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Scaf4Q6PFF0 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Scaf4Q6PFF0 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms