Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm14109-201ENSMUST00000118814 309 ntBASIC12.04□□□□□ -0.48
Sh3rf1Q69ZI1 Gm13665-201ENSMUST00000120830 528 ntBASIC12.04□□□□□ -0.48
Sh3rf1Q69ZI1 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf1Q69ZI1 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Sh3rf1Q69ZI1 Mir6979-201ENSMUST00000183927 56 ntBASIC12.04□□□□□ -0.48
Sh3rf1Q69ZI1 Gm37201-201ENSMUST00000191845 523 ntBASIC12.04□□□□□ -0.48
Sh3rf1Q69ZI1 Gm44405-201ENSMUST00000198952 126 ntBASIC12.04□□□□□ -0.48
Sh3rf1Q69ZI1 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.04□□□□□ -0.48
Sh3rf1Q69ZI1 Gm44262-201ENSMUST00000204969 372 ntBASIC12.04□□□□□ -0.48
Sh3rf1Q69ZI1 Nsd1-205ENSMUST00000224693 852 ntBASIC12.04□□□□□ -0.48
Sh3rf1Q69ZI1 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.04□□□□□ -0.48
Sh3rf1Q69ZI1 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf1Q69ZI1 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf1Q69ZI1 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf1Q69ZI1 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Sh3rf1Q69ZI1 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.04□□□□□ -0.48
Sh3rf1Q69ZI1 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf1Q69ZI1 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf1Q69ZI1 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf1Q69ZI1 Gm37744-201ENSMUST00000194616 1590 ntBASIC12.04□□□□□ -0.48
Sh3rf1Q69ZI1 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf1Q69ZI1 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf1Q69ZI1 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Sh3rf1Q69ZI1 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf1Q69ZI1 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf1Q69ZI1 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf1Q69ZI1 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Gm12058-201ENSMUST00000118614 437 ntBASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Gm23119-201ENSMUST00000158610 140 ntBASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Gm25700-201ENSMUST00000177693 110 ntBASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Gm19208-201ENSMUST00000213861 912 ntBASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf1Q69ZI1 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sh3rf1Q69ZI1 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sh3rf1Q69ZI1 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sh3rf1Q69ZI1 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Sh3rf1Q69ZI1 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sh3rf1Q69ZI1 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Sh3rf1Q69ZI1 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sh3rf1Q69ZI1 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sh3rf1Q69ZI1 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Sh3rf1Q69ZI1 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sh3rf1Q69ZI1 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sh3rf1Q69ZI1 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms