Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.43□□□□□ -0.58
Sdc3Q64519 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sdc3Q64519 Gm23912-201ENSMUST00000104687 87 ntBASIC11.43□□□□□ -0.58
Sdc3Q64519 Gm15515-201ENSMUST00000117827 822 ntBASIC11.43□□□□□ -0.58
Sdc3Q64519 Gm12266-201ENSMUST00000120311 962 ntBASIC11.43□□□□□ -0.58
Sdc3Q64519 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.43□□□□□ -0.58
Sdc3Q64519 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sdc3Q64519 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.43□□□□□ -0.58
Sdc3Q64519 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sdc3Q64519 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.43□□□□□ -0.58
Sdc3Q64519 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.43□□□□□ -0.58
Sdc3Q64519 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.43□□□□□ -0.58
Sdc3Q64519 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sdc3Q64519 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sdc3Q64519 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Sdc3Q64519 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sdc3Q64519 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Sdc3Q64519 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sdc3Q64519 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sdc3Q64519 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sdc3Q64519 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sdc3Q64519 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sdc3Q64519 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sdc3Q64519 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sdc3Q64519 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sdc3Q64519 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Sdc3Q64519 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.43□□□□□ -0.58
Sdc3Q64519 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sdc3Q64519 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc3Q64519 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc3Q64519 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc3Q64519 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Sdc3Q64519 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.42□□□□□ -0.58
Sdc3Q64519 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc3Q64519 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc3Q64519 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc3Q64519 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc3Q64519 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.42□□□□□ -0.58
Sdc3Q64519 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc3Q64519 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.42□□□□□ -0.58
Sdc3Q64519 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.42□□□□□ -0.58
Sdc3Q64519 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc3Q64519 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc3Q64519 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.42□□□□□ -0.58
Sdc3Q64519 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.42□□□□□ -0.58
Sdc3Q64519 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.42□□□□□ -0.58
Sdc3Q64519 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.42□□□□□ -0.58
Sdc3Q64519 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Sdc3Q64519 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Sdc3Q64519 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.42□□□□□ -0.58
Sdc3Q64519 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Sdc3Q64519 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.42□□□□□ -0.58
Sdc3Q64519 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc3Q64519 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc3Q64519 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Sdc3Q64519 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc3Q64519 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc3Q64519 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Sdc3Q64519 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc3Q64519 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc3Q64519 Gm20426-201ENSMUST00000173657 440 ntBASIC11.42□□□□□ -0.58
Sdc3Q64519 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Sdc3Q64519 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.42□□□□□ -0.58
Sdc3Q64519 Gm18711-201ENSMUST00000199341 750 ntBASIC11.42□□□□□ -0.58
Sdc3Q64519 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.42□□□□□ -0.58
Sdc3Q64519 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.42□□□□□ -0.58
Sdc3Q64519 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc3Q64519 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Sdc3Q64519 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc3Q64519 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc3Q64519 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc3Q64519 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc3Q64519 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc3Q64519 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Sdc3Q64519 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Sdc3Q64519 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc3Q64519 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.42□□□□□ -0.58
Sdc3Q64519 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.42□□□□□ -0.58
Sdc3Q64519 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Sdc3Q64519 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc3Q64519 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc3Q64519 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc3Q64519 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc3Q64519 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.42□□□□□ -0.58
Sdc3Q64519 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Sdc3Q64519 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sdc3Q64519 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.41□□□□□ -0.58
Sdc3Q64519 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sdc3Q64519 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Sdc3Q64519 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sdc3Q64519 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Sdc3Q64519 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.41□□□□□ -0.58
Sdc3Q64519 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sdc3Q64519 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sdc3Q64519 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.41□□□□□ -0.58
Sdc3Q64519 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Sdc3Q64519 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sdc3Q64519 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Sdc3Q64519 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.41□□□□□ -0.58
Sdc3Q64519 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms