Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sox17Q61473 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sox17Q61473 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox17Q61473 Gm3890-201ENSMUST00000182416 207 ntBASIC11.07□□□□□ -0.64
Sox17Q61473 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Sox17Q61473 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.07□□□□□ -0.64
Sox17Q61473 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.07□□□□□ -0.64
Sox17Q61473 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.07□□□□□ -0.64
Sox17Q61473 Gm17794-201ENSMUST00000220252 955 ntBASIC11.07□□□□□ -0.64
Sox17Q61473 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox17Q61473 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox17Q61473 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox17Q61473 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.07□□□□□ -0.64
Sox17Q61473 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sox17Q61473 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.07□□□□□ -0.64
Sox17Q61473 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox17Q61473 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox17Q61473 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox17Q61473 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox17Q61473 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sox17Q61473 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Sox17Q61473 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox17Q61473 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sox17Q61473 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox17Q61473 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sox17Q61473 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.07□□□□□ -0.64
Sox17Q61473 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.06□□□□□ -0.64
Sox17Q61473 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.06□□□□□ -0.64
Sox17Q61473 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox17Q61473 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox17Q61473 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox17Q61473 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox17Q61473 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox17Q61473 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.06□□□□□ -0.64
Sox17Q61473 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox17Q61473 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox17Q61473 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox17Q61473 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox17Q61473 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Sox17Q61473 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox17Q61473 Gm4984-201ENSMUST00000115987 360 ntBASIC11.06□□□□□ -0.64
Sox17Q61473 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.06□□□□□ -0.64
Sox17Q61473 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox17Q61473 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox17Q61473 Gm13570-201ENSMUST00000140763 309 ntBASIC11.06□□□□□ -0.64
Sox17Q61473 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.06□□□□□ -0.64
Sox17Q61473 Gm27486-201ENSMUST00000184923 80 ntBASIC11.06□□□□□ -0.64
Sox17Q61473 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox17Q61473 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.06□□□□□ -0.64
Sox17Q61473 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.06□□□□□ -0.64
Sox17Q61473 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox17Q61473 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox17Q61473 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Sox17Q61473 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.06□□□□□ -0.64
Sox17Q61473 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox17Q61473 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Sox17Q61473 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox17Q61473 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.06□□□□□ -0.64
Sox17Q61473 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Sox17Q61473 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.06□□□□□ -0.64
Sox17Q61473 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.06□□□□□ -0.64
Sox17Q61473 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.06□□□□□ -0.64
Sox17Q61473 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Sox17Q61473 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox17Q61473 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Sox17Q61473 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox17Q61473 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox17Q61473 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox17Q61473 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox17Q61473 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox17Q61473 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox17Q61473 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox17Q61473 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox17Q61473 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Sox17Q61473 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Sox17Q61473 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox17Q61473 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox17Q61473 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox17Q61473 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.05□□□□□ -0.64
Sox17Q61473 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox17Q61473 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox17Q61473 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.05□□□□□ -0.64
Sox17Q61473 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox17Q61473 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.05□□□□□ -0.64
Sox17Q61473 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox17Q61473 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox17Q61473 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.05□□□□□ -0.64
Sox17Q61473 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.05□□□□□ -0.64
Sox17Q61473 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox17Q61473 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.05□□□□□ -0.64
Sox17Q61473 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Sox17Q61473 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox17Q61473 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.05□□□□□ -0.64
Sox17Q61473 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.05□□□□□ -0.64
Sox17Q61473 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox17Q61473 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox17Q61473 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.05□□□□□ -0.64
Sox17Q61473 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.05□□□□□ -0.64
Sox17Q61473 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox17Q61473 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms