Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Gm8731-201ENSMUST00000118088 412 ntBASIC12.32□□□□□ -0.44
Smarcd1Q61466 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Smarcd1Q61466 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd1Q61466 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.32□□□□□ -0.44
Smarcd1Q61466 Gm38151-201ENSMUST00000195085 289 ntBASIC12.32□□□□□ -0.44
Smarcd1Q61466 Mir7686-201ENSMUST00000200604 57 ntBASIC12.32□□□□□ -0.44
Smarcd1Q61466 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd1Q61466 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.32□□□□□ -0.44
Smarcd1Q61466 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.32□□□□□ -0.44
Smarcd1Q61466 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Smarcd1Q61466 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd1Q61466 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Smarcd1Q61466 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd1Q61466 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd1Q61466 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd1Q61466 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Smarcd1Q61466 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.31□□□□□ -0.44
Smarcd1Q61466 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Smarcd1Q61466 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
Smarcd1Q61466 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.31□□□□□ -0.44
Smarcd1Q61466 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd1Q61466 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Smarcd1Q61466 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd1Q61466 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Smarcd1Q61466 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.31□□□□□ -0.44
Smarcd1Q61466 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd1Q61466 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.31□□□□□ -0.44
Smarcd1Q61466 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Smarcd1Q61466 Gm9211-201ENSMUST00000182882 975 ntBASIC12.31□□□□□ -0.44
Smarcd1Q61466 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.31□□□□□ -0.44
Smarcd1Q61466 Gm9540-201ENSMUST00000188230 478 ntBASIC12.31□□□□□ -0.44
Smarcd1Q61466 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd1Q61466 Gm6108-201ENSMUST00000208365 367 ntBASIC12.31□□□□□ -0.44
Smarcd1Q61466 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Smarcd1Q61466 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.31□□□□□ -0.44
Smarcd1Q61466 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.31□□□□□ -0.44
Smarcd1Q61466 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd1Q61466 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd1Q61466 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd1Q61466 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd1Q61466 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.31□□□□□ -0.44
Smarcd1Q61466 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd1Q61466 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd1Q61466 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd1Q61466 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd1Q61466 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd1Q61466 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Smarcd1Q61466 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd1Q61466 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Smarcd1Q61466 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd1Q61466 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Smarcd1Q61466 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd1Q61466 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd1Q61466 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarcd1Q61466 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd1Q61466 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd1Q61466 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smarcd1Q61466 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms