Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.3□□□□□ -0.6
Nr1h4Q60641 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nr1h4Q60641 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nr1h4Q60641 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.3□□□□□ -0.6
Nr1h4Q60641 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.3□□□□□ -0.6
Nr1h4Q60641 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nr1h4Q60641 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nr1h4Q60641 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.3□□□□□ -0.6
Nr1h4Q60641 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nr1h4Q60641 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Nr1h4Q60641 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Gm10434-201ENSMUST00000101158 471 ntBASIC11.29□□□□□ -0.6
Nr1h4Q60641 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Mir1247-201ENSMUST00000116706 82 ntBASIC11.29□□□□□ -0.6
Nr1h4Q60641 Gm12390-201ENSMUST00000117897 397 ntBASIC11.29□□□□□ -0.6
Nr1h4Q60641 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.29□□□□□ -0.6
Nr1h4Q60641 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Gm8420-201ENSMUST00000097103 598 ntBASIC11.29□□□□□ -0.6
Nr1h4Q60641 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Nr1h4Q60641 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nr1h4Q60641 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nr1h4Q60641 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nr1h4Q60641 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Nr1h4Q60641 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Nr1h4Q60641 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nr1h4Q60641 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.28□□□□□ -0.6
Nr1h4Q60641 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nr1h4Q60641 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nr1h4Q60641 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nr1h4Q60641 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nr1h4Q60641 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nr1h4Q60641 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nr1h4Q60641 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nr1h4Q60641 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nr1h4Q60641 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms