Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc88aQ5SNZ0 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc88aQ5SNZ0 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC13.52□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm42816-201ENSMUST00000198433 325 ntBASIC13.52□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm43752-201ENSMUST00000198475 697 ntBASIC13.52□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm45113-201ENSMUST00000207518 165 ntBASIC13.52□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm35713-201ENSMUST00000210516 199 ntBASIC13.52□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.52□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm45410-201ENSMUST00000211331 1093 ntBASIC13.52□□□□□ -0.25
Ccdc88aQ5SNZ0 Olfr692-202ENSMUST00000217827 1126 ntBASIC13.52□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm18968-201ENSMUST00000221319 862 ntBASIC13.52□□□□□ -0.25
Ccdc88aQ5SNZ0 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC13.52□□□□□ -0.25
Ccdc88aQ5SNZ0 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc88aQ5SNZ0 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Ccdc88aQ5SNZ0 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc88aQ5SNZ0 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.52□□□□□ -0.25
Ccdc88aQ5SNZ0 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc88aQ5SNZ0 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ccdc88aQ5SNZ0 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc88aQ5SNZ0 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm45199-201ENSMUST00000207640 1507 ntBASIC13.51□□□□□ -0.25
Ccdc88aQ5SNZ0 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc88aQ5SNZ0 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc88aQ5SNZ0 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ccdc88aQ5SNZ0 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc88aQ5SNZ0 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc88aQ5SNZ0 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm12218-201ENSMUST00000117666 399 ntBASIC13.51□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm13019-201ENSMUST00000120000 276 ntBASIC13.51□□□□□ -0.25
Ccdc88aQ5SNZ0 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc88aQ5SNZ0 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm9916-201ENSMUST00000192943 1228 ntBASIC13.51□□□□□ -0.25
Ccdc88aQ5SNZ0 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc88aQ5SNZ0 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc88aQ5SNZ0 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc88aQ5SNZ0 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ccdc88aQ5SNZ0 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.51□□□□□ -0.25
Ccdc88aQ5SNZ0 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.51□□□□□ -0.25
Ccdc88aQ5SNZ0 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc88aQ5SNZ0 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc88aQ5SNZ0 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ccdc88aQ5SNZ0 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc88aQ5SNZ0 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc88aQ5SNZ0 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc88aQ5SNZ0 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc88aQ5SNZ0 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.51□□□□□ -0.25
Ccdc88aQ5SNZ0 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.51□□□□□ -0.25
Ccdc88aQ5SNZ0 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc88aQ5SNZ0 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc88aQ5SNZ0 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm22594-201ENSMUST00000104251 130 ntBASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm14892-201ENSMUST00000117636 267 ntBASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm14213-201ENSMUST00000119778 768 ntBASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm24398-201ENSMUST00000157870 109 ntBASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm19587-201ENSMUST00000191395 545 ntBASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 Ighv5-11-201ENSMUST00000193354 371 ntBASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm12783-201ENSMUST00000121425 397 ntBASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm4654-201ENSMUST00000183305 982 ntBASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm7504-201ENSMUST00000201449 424 ntBASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc88aQ5SNZ0 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc88aQ5SNZ0 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc88aQ5SNZ0 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc88aQ5SNZ0 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc88aQ5SNZ0 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm12856-201ENSMUST00000119471 1293 ntBASIC13.49□□□□□ -0.25
Ccdc88aQ5SNZ0 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc88aQ5SNZ0 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc88aQ5SNZ0 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Ccdc88aQ5SNZ0 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC13.49□□□□□ -0.25
Ccdc88aQ5SNZ0 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms