Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.09□□□□□ -0.63
Trim40Q3UWA4 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.09□□□□□ -0.63
Trim40Q3UWA4 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim40Q3UWA4 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim40Q3UWA4 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim40Q3UWA4 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.09□□□□□ -0.63
Trim40Q3UWA4 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.09□□□□□ -0.63
Trim40Q3UWA4 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.09□□□□□ -0.63
Trim40Q3UWA4 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim40Q3UWA4 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.09□□□□□ -0.63
Trim40Q3UWA4 Gm27839-201ENSMUST00000184242 106 ntBASIC11.09□□□□□ -0.63
Trim40Q3UWA4 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim40Q3UWA4 Gm42693-201ENSMUST00000196779 631 ntBASIC11.09□□□□□ -0.63
Trim40Q3UWA4 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.09□□□□□ -0.63
Trim40Q3UWA4 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.09□□□□□ -0.63
Trim40Q3UWA4 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trim40Q3UWA4 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.09□□□□□ -0.63
Trim40Q3UWA4 Gm5904-201ENSMUST00000210286 865 ntBASIC11.09□□□□□ -0.63
Trim40Q3UWA4 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.09□□□□□ -0.63
Trim40Q3UWA4 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim40Q3UWA4 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Trim40Q3UWA4 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.09□□□□□ -0.63
Trim40Q3UWA4 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim40Q3UWA4 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.09□□□□□ -0.63
Trim40Q3UWA4 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim40Q3UWA4 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trim40Q3UWA4 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim40Q3UWA4 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.09□□□□□ -0.63
Trim40Q3UWA4 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim40Q3UWA4 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim40Q3UWA4 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.09□□□□□ -0.63
Trim40Q3UWA4 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim40Q3UWA4 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim40Q3UWA4 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim40Q3UWA4 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.09□□□□□ -0.63
Trim40Q3UWA4 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.63
Trim40Q3UWA4 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Gm9794-201ENSMUST00000202370 423 ntBASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Gm5781-201ENSMUST00000219792 443 ntBASIC11.08□□□□□ -0.64
Trim40Q3UWA4 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.08□□□□□ -0.64
Trim40Q3UWA4 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim40Q3UWA4 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim40Q3UWA4 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim40Q3UWA4 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.07□□□□□ -0.64
Trim40Q3UWA4 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11.07□□□□□ -0.64
Trim40Q3UWA4 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trim40Q3UWA4 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim40Q3UWA4 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim40Q3UWA4 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Trim40Q3UWA4 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trim40Q3UWA4 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Trim40Q3UWA4 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim40Q3UWA4 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim40Q3UWA4 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim40Q3UWA4 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trim40Q3UWA4 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms