Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sf3b2Q3UJB0 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sf3b2Q3UJB0 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sf3b2Q3UJB0 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sf3b2Q3UJB0 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sf3b2Q3UJB0 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Sf3b2Q3UJB0 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sf3b2Q3UJB0 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sf3b2Q3UJB0 AC107763.1-201ENSMUST00000226082 1365 ntBASIC15.27■□□□□ 0.04
Sf3b2Q3UJB0 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC15.27■□□□□ 0.04
Sf3b2Q3UJB0 Gm23612-201ENSMUST00000103823 110 ntBASIC15.27■□□□□ 0.04
Sf3b2Q3UJB0 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC15.27■□□□□ 0.04
Sf3b2Q3UJB0 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Sf3b2Q3UJB0 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sf3b2Q3UJB0 Gm13981-201ENSMUST00000122360 447 ntBASIC15.27■□□□□ 0.04
Sf3b2Q3UJB0 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC15.27■□□□□ 0.04
Sf3b2Q3UJB0 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sf3b2Q3UJB0 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Sf3b2Q3UJB0 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC15.27■□□□□ 0.04
Sf3b2Q3UJB0 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sf3b2Q3UJB0 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sf3b2Q3UJB0 Gm23576-201ENSMUST00000179918 110 ntBASIC15.27■□□□□ 0.04
Sf3b2Q3UJB0 Gm2448-201ENSMUST00000207080 559 ntBASIC15.27■□□□□ 0.04
Sf3b2Q3UJB0 Gm45310-201ENSMUST00000210436 275 ntBASIC15.27■□□□□ 0.04
Sf3b2Q3UJB0 Gm2594-201ENSMUST00000214774 742 ntBASIC15.27■□□□□ 0.04
Sf3b2Q3UJB0 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC15.27■□□□□ 0.04
Sf3b2Q3UJB0 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC15.27■□□□□ 0.04
Sf3b2Q3UJB0 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sf3b2Q3UJB0 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Sf3b2Q3UJB0 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sf3b2Q3UJB0 Cog3-203ENSMUST00000227473 4197 ntBASIC15.27■□□□□ 0.03
Sf3b2Q3UJB0 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sf3b2Q3UJB0 Gm6189-201ENSMUST00000164487 2082 ntBASIC15.27■□□□□ 0.03
Sf3b2Q3UJB0 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Sf3b2Q3UJB0 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.03
Sf3b2Q3UJB0 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sf3b2Q3UJB0 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sf3b2Q3UJB0 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sf3b2Q3UJB0 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sf3b2Q3UJB0 Gm43321-201ENSMUST00000198897 2409 ntBASIC15.27■□□□□ 0.03
Sf3b2Q3UJB0 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sf3b2Q3UJB0 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC15.27■□□□□ 0.03
Sf3b2Q3UJB0 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sf3b2Q3UJB0 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sf3b2Q3UJB0 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC15.27■□□□□ 0.03
Sf3b2Q3UJB0 Gm3052-202ENSMUST00000188254 2224 ntBASIC15.27■□□□□ 0.03
Sf3b2Q3UJB0 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Gm2420-201ENSMUST00000119864 2149 ntBASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Gm13039-201ENSMUST00000118638 794 ntBASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Gm14497-201ENSMUST00000119537 580 ntBASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Mir432-201ENSMUST00000157230 75 ntBASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Gm17221-201ENSMUST00000163909 481 ntBASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Gm17073-201ENSMUST00000168069 556 ntBASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Gm17709-201ENSMUST00000174536 1096 ntBASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Gm8197-202ENSMUST00000193422 934 ntBASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Gm6606-201ENSMUST00000193613 947 ntBASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Gm29808-201ENSMUST00000194419 468 ntBASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Gm7939-201ENSMUST00000201233 1050 ntBASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 BC080696-201ENSMUST00000202858 1218 ntBASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Gm5780-201ENSMUST00000217774 1834 ntBASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Gm44851-201ENSMUST00000205735 2309 ntBASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3b2Q3UJB0 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Sf3b2Q3UJB0 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sf3b2Q3UJB0 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sf3b2Q3UJB0 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sf3b2Q3UJB0 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sf3b2Q3UJB0 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sf3b2Q3UJB0 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms