Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Mir1938-201ENSMUST00000158746 100 ntBASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Gm13097-201ENSMUST00000210722 397 ntBASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Gm37648-201ENSMUST00000192072 2563 ntBASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.16□□□□□ -0.62
Brf2Q3UAW9 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Brf2Q3UAW9 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Brf2Q3UAW9 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Brf2Q3UAW9 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Brf2Q3UAW9 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.15□□□□□ -0.62
Brf2Q3UAW9 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Brf2Q3UAW9 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Brf2Q3UAW9 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Brf2Q3UAW9 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Brf2Q3UAW9 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Brf2Q3UAW9 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.15□□□□□ -0.62
Brf2Q3UAW9 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Brf2Q3UAW9 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Brf2Q3UAW9 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Brf2Q3UAW9 Gm24255-201ENSMUST00000104481 128 ntBASIC11.15□□□□□ -0.62
Brf2Q3UAW9 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.15□□□□□ -0.62
Brf2Q3UAW9 Gm11700-201ENSMUST00000119409 403 ntBASIC11.15□□□□□ -0.62
Brf2Q3UAW9 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Brf2Q3UAW9 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.15□□□□□ -0.62
Brf2Q3UAW9 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Brf2Q3UAW9 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Brf2Q3UAW9 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.15□□□□□ -0.62
Brf2Q3UAW9 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.15□□□□□ -0.62
Brf2Q3UAW9 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Brf2Q3UAW9 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.15□□□□□ -0.62
Brf2Q3UAW9 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.15□□□□□ -0.62
Brf2Q3UAW9 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Brf2Q3UAW9 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Brf2Q3UAW9 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.15□□□□□ -0.62
Brf2Q3UAW9 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Brf2Q3UAW9 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Brf2Q3UAW9 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Brf2Q3UAW9 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
Brf2Q3UAW9 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.15□□□□□ -0.63
Brf2Q3UAW9 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Brf2Q3UAW9 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Brf2Q3UAW9 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Brf2Q3UAW9 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Brf2Q3UAW9 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Gm15198-201ENSMUST00000117283 177 ntBASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Gm13665-201ENSMUST00000120830 528 ntBASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.14□□□□□ -0.63
Brf2Q3UAW9 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms