Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43aQ3TL54 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Gm11700-201ENSMUST00000119409 403 ntBASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Gm11793-201ENSMUST00000120433 981 ntBASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43aQ3TL54 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Gm27501-201ENSMUST00000183599 107 ntBASIC12.54□□□□□ -0.4
Trim43aQ3TL54 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Gm18935-201ENSMUST00000212692 664 ntBASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms