Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Khdc4Q3TCX3 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Mir7677-201ENSMUST00000184226 67 ntBASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Gm19353-201ENSMUST00000184561 445 ntBASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Gm37835-201ENSMUST00000193305 361 ntBASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Gm45770-201ENSMUST00000212105 616 ntBASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Gm5369-201ENSMUST00000217499 588 ntBASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Khdc4Q3TCX3 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.29□□□□□ -0.6
Khdc4Q3TCX3 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Khdc4Q3TCX3 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Khdc4Q3TCX3 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Khdc4Q3TCX3 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Khdc4Q3TCX3 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.29□□□□□ -0.6
Khdc4Q3TCX3 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Khdc4Q3TCX3 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Khdc4Q3TCX3 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Khdc4Q3TCX3 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Khdc4Q3TCX3 Gm12165-201ENSMUST00000117047 342 ntBASIC11.29□□□□□ -0.6
Khdc4Q3TCX3 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.29□□□□□ -0.6
Khdc4Q3TCX3 Gm10051-201ENSMUST00000145209 414 ntBASIC11.29□□□□□ -0.6
Khdc4Q3TCX3 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Khdc4Q3TCX3 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.29□□□□□ -0.6
Khdc4Q3TCX3 Gm19459-201ENSMUST00000176240 835 ntBASIC11.29□□□□□ -0.6
Khdc4Q3TCX3 Gm4034-201ENSMUST00000187674 480 ntBASIC11.29□□□□□ -0.6
Khdc4Q3TCX3 Gm37246-201ENSMUST00000192665 835 ntBASIC11.29□□□□□ -0.6
Khdc4Q3TCX3 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.29□□□□□ -0.6
Khdc4Q3TCX3 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Khdc4Q3TCX3 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.29□□□□□ -0.6
Khdc4Q3TCX3 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Khdc4Q3TCX3 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Khdc4Q3TCX3 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Khdc4Q3TCX3 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Khdc4Q3TCX3 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Khdc4Q3TCX3 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Khdc4Q3TCX3 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Khdc4Q3TCX3 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Khdc4Q3TCX3 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Khdc4Q3TCX3 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.29□□□□□ -0.6
Khdc4Q3TCX3 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Khdc4Q3TCX3 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Khdc4Q3TCX3 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
Khdc4Q3TCX3 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.28□□□□□ -0.6
Khdc4Q3TCX3 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Khdc4Q3TCX3 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Khdc4Q3TCX3 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms