Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Tff1Q08423 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Tff1Q08423 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Tff1Q08423 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC9.86□□□□□ -0.83
Tff1Q08423 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC9.86□□□□□ -0.83
Tff1Q08423 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Tff1Q08423 Gm11439-201ENSMUST00000118598 409 ntBASIC9.86□□□□□ -0.83
Tff1Q08423 Gm14726-201ENSMUST00000120623 896 ntBASIC9.86□□□□□ -0.83
Tff1Q08423 Gm24548-201ENSMUST00000158650 108 ntBASIC9.86□□□□□ -0.83
Tff1Q08423 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC9.86□□□□□ -0.83
Tff1Q08423 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC9.86□□□□□ -0.83
Tff1Q08423 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Tff1Q08423 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Tff1Q08423 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC9.86□□□□□ -0.83
Tff1Q08423 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Tff1Q08423 Gm37201-201ENSMUST00000191845 523 ntBASIC9.86□□□□□ -0.83
Tff1Q08423 Gm9136-201ENSMUST00000193368 454 ntBASIC9.86□□□□□ -0.83
Tff1Q08423 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC9.86□□□□□ -0.83
Tff1Q08423 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC9.86□□□□□ -0.83
Tff1Q08423 Gm5869-201ENSMUST00000200248 1257 ntBASIC9.86□□□□□ -0.83
Tff1Q08423 Gm45186-201ENSMUST00000206874 478 ntBASIC9.86□□□□□ -0.83
Tff1Q08423 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC9.86□□□□□ -0.83
Tff1Q08423 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC9.86□□□□□ -0.83
Tff1Q08423 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC9.86□□□□□ -0.83
Tff1Q08423 Gm18615-201ENSMUST00000222919 1031 ntBASIC9.86□□□□□ -0.83
Tff1Q08423 AC123857.2-201ENSMUST00000225756 1582 ntBASIC9.86□□□□□ -0.83
Tff1Q08423 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Tff1Q08423 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Tff1Q08423 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Tff1Q08423 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Tff1Q08423 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Tff1Q08423 AC122291.1-201ENSMUST00000228937 5748 ntBASIC9.86□□□□□ -0.83
Tff1Q08423 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Tff1Q08423 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Tff1Q08423 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Tff1Q08423 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC9.86□□□□□ -0.83
Tff1Q08423 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC9.86□□□□□ -0.83
Tff1Q08423 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Tff1Q08423 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Tff1Q08423 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Tff1Q08423 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Tff1Q08423 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Tff1Q08423 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Tff1Q08423 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Tff1Q08423 Gm8862-201ENSMUST00000198379 1346 ntBASIC9.85□□□□□ -0.83
Tff1Q08423 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC9.85□□□□□ -0.83
Tff1Q08423 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Tff1Q08423 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Tff1Q08423 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Tff1Q08423 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Tff1Q08423 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Tff1Q08423 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Tff1Q08423 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Tff1Q08423 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC9.85□□□□□ -0.83
Tff1Q08423 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
Tff1Q08423 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Tff1Q08423 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Tff1Q08423 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Tff1Q08423 Gm13316-201ENSMUST00000140537 691 ntBASIC9.85□□□□□ -0.83
Tff1Q08423 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Tff1Q08423 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Tff1Q08423 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC9.85□□□□□ -0.83
Tff1Q08423 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC9.85□□□□□ -0.83
Tff1Q08423 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC9.85□□□□□ -0.83
Tff1Q08423 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Tff1Q08423 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Tff1Q08423 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Tff1Q08423 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Tff1Q08423 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Tff1Q08423 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Tff1Q08423 Gm45428-201ENSMUST00000209619 1789 ntBASIC9.85□□□□□ -0.83
Tff1Q08423 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Tff1Q08423 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Tff1Q08423 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Tff1Q08423 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Tff1Q08423 Gm42463-201ENSMUST00000198041 4886 ntBASIC9.85□□□□□ -0.83
Tff1Q08423 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Tff1Q08423 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Tff1Q08423 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Tff1Q08423 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Tff1Q08423 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC9.85□□□□□ -0.83
Tff1Q08423 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Tff1Q08423 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC9.85□□□□□ -0.83
Tff1Q08423 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Tff1Q08423 Gm13142-201ENSMUST00000117213 1453 ntBASIC9.85□□□□□ -0.83
Tff1Q08423 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC9.85□□□□□ -0.83
Tff1Q08423 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Tff1Q08423 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC9.84□□□□□ -0.83
Tff1Q08423 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Tff1Q08423 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Tff1Q08423 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Tff1Q08423 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Tff1Q08423 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Tff1Q08423 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Tff1Q08423 AC108858.2-201ENSMUST00000228186 1425 ntBASIC9.84□□□□□ -0.83
Tff1Q08423 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Tff1Q08423 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Tff1Q08423 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Tff1Q08423 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Tff1Q08423 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms