Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.04□□□□□ -0.48
Ebf1Q07802 Gm4726-201ENSMUST00000135604 736 ntBASIC12.04□□□□□ -0.48
Ebf1Q07802 Gm6019-201ENSMUST00000148369 736 ntBASIC12.04□□□□□ -0.48
Ebf1Q07802 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.04□□□□□ -0.48
Ebf1Q07802 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf1Q07802 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf1Q07802 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ebf1Q07802 Gm23153-201ENSMUST00000175323 313 ntBASIC12.04□□□□□ -0.48
Ebf1Q07802 Mir7076-201ENSMUST00000183519 74 ntBASIC12.04□□□□□ -0.48
Ebf1Q07802 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.04□□□□□ -0.48
Ebf1Q07802 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf1Q07802 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC12.04□□□□□ -0.48
Ebf1Q07802 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.04□□□□□ -0.48
Ebf1Q07802 AC132901.1-201ENSMUST00000224345 508 ntBASIC12.04□□□□□ -0.48
Ebf1Q07802 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf1Q07802 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ebf1Q07802 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf1Q07802 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf1Q07802 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ebf1Q07802 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf1Q07802 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.04□□□□□ -0.48
Ebf1Q07802 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf1Q07802 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf1Q07802 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ebf1Q07802 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf1Q07802 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf1Q07802 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf1Q07802 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.04□□□□□ -0.48
Ebf1Q07802 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf1Q07802 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf1Q07802 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ebf1Q07802 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf1Q07802 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf1Q07802 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ebf1Q07802 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf1Q07802 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf1Q07802 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf1Q07802 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf1Q07802 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf1Q07802 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf1Q07802 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.03□□□□□ -0.48
Ebf1Q07802 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf1Q07802 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf1Q07802 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf1Q07802 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC12.03□□□□□ -0.48
Ebf1Q07802 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.03□□□□□ -0.48
Ebf1Q07802 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.03□□□□□ -0.48
Ebf1Q07802 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.03□□□□□ -0.48
Ebf1Q07802 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf1Q07802 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.03□□□□□ -0.48
Ebf1Q07802 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf1Q07802 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf1Q07802 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.03□□□□□ -0.48
Ebf1Q07802 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.03□□□□□ -0.48
Ebf1Q07802 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf1Q07802 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.03□□□□□ -0.48
Ebf1Q07802 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ebf1Q07802 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf1Q07802 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf1Q07802 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf1Q07802 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf1Q07802 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Ebf1Q07802 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Ebf1Q07802 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf1Q07802 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.03□□□□□ -0.48
Ebf1Q07802 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf1Q07802 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf1Q07802 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.03□□□□□ -0.48
Ebf1Q07802 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.03□□□□□ -0.48
Ebf1Q07802 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.03□□□□□ -0.48
Ebf1Q07802 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf1Q07802 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.03□□□□□ -0.48
Ebf1Q07802 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf1Q07802 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf1Q07802 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf1Q07802 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ebf1Q07802 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.03□□□□□ -0.48
Ebf1Q07802 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ebf1Q07802 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Ebf1Q07802 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ebf1Q07802 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.02□□□□□ -0.48
Ebf1Q07802 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ebf1Q07802 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ebf1Q07802 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.02□□□□□ -0.48
Ebf1Q07802 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ebf1Q07802 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ebf1Q07802 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Ebf1Q07802 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ebf1Q07802 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ebf1Q07802 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ebf1Q07802 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf1Q07802 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf1Q07802 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Ebf1Q07802 Gm13263-201ENSMUST00000121271 838 ntBASIC12.02□□□□□ -0.49
Ebf1Q07802 Gm12164-201ENSMUST00000121695 551 ntBASIC12.02□□□□□ -0.49
Ebf1Q07802 Gm8737-201ENSMUST00000122208 642 ntBASIC12.02□□□□□ -0.49
Ebf1Q07802 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf1Q07802 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.02□□□□□ -0.49
Ebf1Q07802 Gm28686-201ENSMUST00000187404 609 ntBASIC12.02□□□□□ -0.49
Ebf1Q07802 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms