Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC11.98□□□□□ -0.49
Col9a1Q05722 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Col9a1Q05722 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC11.98□□□□□ -0.49
Col9a1Q05722 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Col9a1Q05722 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Col9a1Q05722 Gm11411-201ENSMUST00000117951 719 ntBASIC11.98□□□□□ -0.49
Col9a1Q05722 Gm12418-201ENSMUST00000118116 942 ntBASIC11.98□□□□□ -0.49
Col9a1Q05722 Gm14906-201ENSMUST00000119265 390 ntBASIC11.98□□□□□ -0.49
Col9a1Q05722 Gm14227-201ENSMUST00000119431 629 ntBASIC11.98□□□□□ -0.49
Col9a1Q05722 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC11.98□□□□□ -0.49
Col9a1Q05722 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC11.98□□□□□ -0.49
Col9a1Q05722 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC11.98□□□□□ -0.49
Col9a1Q05722 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Col9a1Q05722 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Col9a1Q05722 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Col9a1Q05722 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Col9a1Q05722 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC11.98□□□□□ -0.49
Col9a1Q05722 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC11.98□□□□□ -0.49
Col9a1Q05722 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC11.98□□□□□ -0.49
Col9a1Q05722 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Col9a1Q05722 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC11.98□□□□□ -0.49
Col9a1Q05722 Gm33112-201ENSMUST00000193971 699 ntBASIC11.98□□□□□ -0.49
Col9a1Q05722 Gm38268-201ENSMUST00000195813 193 ntBASIC11.98□□□□□ -0.49
Col9a1Q05722 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC11.98□□□□□ -0.49
Col9a1Q05722 Gm8234-201ENSMUST00000198523 1107 ntBASIC11.98□□□□□ -0.49
Col9a1Q05722 Gm43726-201ENSMUST00000199110 775 ntBASIC11.98□□□□□ -0.49
Col9a1Q05722 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 Gm43093-201ENSMUST00000202439 1213 ntBASIC11.98□□□□□ -0.49
Col9a1Q05722 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 Gm45217-201ENSMUST00000206576 1026 ntBASIC11.98□□□□□ -0.49
Col9a1Q05722 Gm44837-201ENSMUST00000206863 717 ntBASIC11.98□□□□□ -0.49
Col9a1Q05722 Gm8268-201ENSMUST00000209683 458 ntBASIC11.98□□□□□ -0.49
Col9a1Q05722 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC11.98□□□□□ -0.49
Col9a1Q05722 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC11.98□□□□□ -0.49
Col9a1Q05722 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC11.98□□□□□ -0.49
Col9a1Q05722 AC162932.1-201ENSMUST00000219209 872 ntBASIC11.98□□□□□ -0.49
Col9a1Q05722 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Col9a1Q05722 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Col9a1Q05722 Fxyd7-201ENSMUST00000073892 693 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 Gm6460-201ENSMUST00000088616 1168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC11.98□□□□□ -0.49
Col9a1Q05722 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Col9a1Q05722 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Col9a1Q05722 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Col9a1Q05722 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Col9a1Q05722 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col9a1Q05722 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Col9a1Q05722 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col9a1Q05722 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col9a1Q05722 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.97□□□□□ -0.49
Col9a1Q05722 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.97□□□□□ -0.49
Col9a1Q05722 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Col9a1Q05722 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col9a1Q05722 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col9a1Q05722 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col9a1Q05722 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Col9a1Q05722 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col9a1Q05722 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col9a1Q05722 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col9a1Q05722 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col9a1Q05722 Mir874-201ENSMUST00000104769 76 ntBASIC11.97□□□□□ -0.49
Col9a1Q05722 Dnhd1-201ENSMUST00000106776 1146 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col9a1Q05722 Gm22032-201ENSMUST00000116946 116 ntBASIC11.97□□□□□ -0.49
Col9a1Q05722 Gm11500-201ENSMUST00000118237 601 ntBASIC11.97□□□□□ -0.49
Col9a1Q05722 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC11.97□□□□□ -0.49
Col9a1Q05722 Gm16284-201ENSMUST00000140995 400 ntBASIC11.97□□□□□ -0.49
Col9a1Q05722 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col9a1Q05722 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.97□□□□□ -0.49
Col9a1Q05722 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.97□□□□□ -0.49
Col9a1Q05722 Tac1-205ENSMUST00000185187 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col9a1Q05722 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col9a1Q05722 Gm7891-201ENSMUST00000190284 843 ntBASIC11.97□□□□□ -0.49
Col9a1Q05722 Gm8226-201ENSMUST00000190511 798 ntBASIC11.97□□□□□ -0.49
Col9a1Q05722 Gm19086-201ENSMUST00000190772 665 ntBASIC11.97□□□□□ -0.49
Col9a1Q05722 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.97□□□□□ -0.49
Col9a1Q05722 Gm44809-201ENSMUST00000208305 993 ntBASIC11.97□□□□□ -0.49
Col9a1Q05722 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.97□□□□□ -0.49
Col9a1Q05722 Gm19994-201ENSMUST00000217086 586 ntBASIC11.97□□□□□ -0.49
Col9a1Q05722 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Col9a1Q05722 3830406C13Rik-205ENSMUST00000223702 900 ntBASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms