Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trim43bP86448 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trim43bP86448 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim43bP86448 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim43bP86448 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim43bP86448 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim43bP86448 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
Trim43bP86448 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trim43bP86448 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim43bP86448 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trim43bP86448 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim43bP86448 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trim43bP86448 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43bP86448 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.2□□□□□ -0.46
Trim43bP86448 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43bP86448 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43bP86448 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43bP86448 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43bP86448 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43bP86448 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.2□□□□□ -0.46
Trim43bP86448 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43bP86448 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43bP86448 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43bP86448 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43bP86448 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Trim43bP86448 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43bP86448 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43bP86448 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43bP86448 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43bP86448 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43bP86448 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43bP86448 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43bP86448 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Trim43bP86448 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.2□□□□□ -0.46
Trim43bP86448 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trim43bP86448 Gm15276-201ENSMUST00000145953 498 ntBASIC12.2□□□□□ -0.46
Trim43bP86448 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43bP86448 Gm3096-201ENSMUST00000185770 364 ntBASIC12.2□□□□□ -0.46
Trim43bP86448 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.2□□□□□ -0.46
Trim43bP86448 Gm18304-201ENSMUST00000189162 546 ntBASIC12.2□□□□□ -0.46
Trim43bP86448 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.2□□□□□ -0.46
Trim43bP86448 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.2□□□□□ -0.46
Trim43bP86448 Gm6082-201ENSMUST00000215204 454 ntBASIC12.2□□□□□ -0.46
Trim43bP86448 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.2□□□□□ -0.46
Trim43bP86448 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43bP86448 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43bP86448 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43bP86448 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trim43bP86448 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43bP86448 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43bP86448 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Trim43bP86448 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43bP86448 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43bP86448 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43bP86448 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trim43bP86448 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43bP86448 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43bP86448 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43bP86448 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43bP86448 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43bP86448 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.2□□□□□ -0.46
Trim43bP86448 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43bP86448 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43bP86448 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trim43bP86448 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43bP86448 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43bP86448 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim43bP86448 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43bP86448 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim43bP86448 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trim43bP86448 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.19□□□□□ -0.46
Trim43bP86448 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43bP86448 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43bP86448 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43bP86448 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Trim43bP86448 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trim43bP86448 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43bP86448 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.19□□□□□ -0.46
Trim43bP86448 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43bP86448 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Trim43bP86448 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim43bP86448 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43bP86448 Gm38241-201ENSMUST00000192641 898 ntBASIC12.19□□□□□ -0.46
Trim43bP86448 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43bP86448 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43bP86448 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trim43bP86448 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.19□□□□□ -0.46
Trim43bP86448 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.19□□□□□ -0.46
Trim43bP86448 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43bP86448 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43bP86448 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43bP86448 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim43bP86448 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43bP86448 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43bP86448 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43bP86448 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43bP86448 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Trim43bP86448 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim43bP86448 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim43bP86448 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms