Protein–RNA interactions for Protein: P84444

Ccl21a, C-C motif chemokine 21a, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl21aP84444 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl21aP84444 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl21aP84444 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl21aP84444 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Ccl21aP84444 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl21aP84444 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl21aP84444 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl21aP84444 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl21aP84444 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl21aP84444 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl21aP84444 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl21aP84444 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl21aP84444 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl21aP84444 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC9.82□□□□□ -0.84
Ccl21aP84444 AC154262.2-202ENSMUST00000225158 1331 ntBASIC9.82□□□□□ -0.84
Ccl21aP84444 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Ccl21aP84444 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Ccl21aP84444 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl21aP84444 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl21aP84444 AC160405.1-201ENSMUST00000218207 1545 ntBASIC9.82□□□□□ -0.84
Ccl21aP84444 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl21aP84444 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl21aP84444 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl21aP84444 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl21aP84444 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl21aP84444 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl21aP84444 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl21aP84444 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl21aP84444 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl21aP84444 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Ccl21aP84444 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl21aP84444 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl21aP84444 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl21aP84444 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC9.82□□□□□ -0.84
Ccl21aP84444 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.84
Ccl21aP84444 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl21aP84444 Gm23255-201ENSMUST00000102244 110 ntBASIC9.82□□□□□ -0.84
Ccl21aP84444 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl21aP84444 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Ccl21aP84444 Gm9166-201ENSMUST00000120293 561 ntBASIC9.82□□□□□ -0.84
Ccl21aP84444 Gng5-ps-201ENSMUST00000120931 205 ntBASIC9.82□□□□□ -0.84
Ccl21aP84444 Gm16459-201ENSMUST00000121443 686 ntBASIC9.82□□□□□ -0.84
Ccl21aP84444 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC9.82□□□□□ -0.84
Ccl21aP84444 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC9.82□□□□□ -0.84
Ccl21aP84444 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl21aP84444 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl21aP84444 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC9.82□□□□□ -0.84
Ccl21aP84444 Gm7069-201ENSMUST00000182418 1008 ntBASIC9.82□□□□□ -0.84
Ccl21aP84444 Mir6973a-201ENSMUST00000183646 78 ntBASIC9.82□□□□□ -0.84
Ccl21aP84444 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl21aP84444 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
Ccl21aP84444 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl21aP84444 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl21aP84444 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Ccl21aP84444 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl21aP84444 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl21aP84444 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl21aP84444 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl21aP84444 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC9.82□□□□□ -0.84
Ccl21aP84444 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl21aP84444 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl21aP84444 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl21aP84444 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC9.82□□□□□ -0.84
Ccl21aP84444 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl21aP84444 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl21aP84444 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC9.82□□□□□ -0.84
Ccl21aP84444 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl21aP84444 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl21aP84444 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl21aP84444 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl21aP84444 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ccl21aP84444 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC9.82□□□□□ -0.84
Ccl21aP84444 Gm8155-201ENSMUST00000216363 1612 ntBASIC9.82□□□□□ -0.84
Ccl21aP84444 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl21aP84444 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl21aP84444 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Ccl21aP84444 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl21aP84444 Gm44065-201ENSMUST00000203184 3527 ntBASIC9.81□□□□□ -0.84
Ccl21aP84444 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl21aP84444 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl21aP84444 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC9.81□□□□□ -0.84
Ccl21aP84444 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl21aP84444 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl21aP84444 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl21aP84444 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC9.81□□□□□ -0.84
Ccl21aP84444 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl21aP84444 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl21aP84444 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl21aP84444 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
Ccl21aP84444 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Ccl21aP84444 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl21aP84444 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl21aP84444 Gm24279-201ENSMUST00000104236 131 ntBASIC9.81□□□□□ -0.84
Ccl21aP84444 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl21aP84444 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl21aP84444 Gm2420-201ENSMUST00000119864 2149 ntBASIC9.81□□□□□ -0.84
Ccl21aP84444 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl21aP84444 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Ccl21aP84444 Gm17709-201ENSMUST00000174536 1096 ntBASIC9.81□□□□□ -0.84
Ccl21aP84444 Gm17796-201ENSMUST00000189015 1213 ntBASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 100.8 ms