Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcbP82349 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcbP82349 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcbP82349 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.61□□□□□ -0.71
SgcbP82349 Gm26286-201ENSMUST00000104166 134 ntBASIC10.61□□□□□ -0.71
SgcbP82349 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcbP82349 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
SgcbP82349 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC10.61□□□□□ -0.71
SgcbP82349 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SgcbP82349 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.61□□□□□ -0.71
SgcbP82349 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC10.61□□□□□ -0.71
SgcbP82349 Gm28686-201ENSMUST00000187404 609 ntBASIC10.61□□□□□ -0.71
SgcbP82349 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcbP82349 Gm19287-201ENSMUST00000203190 358 ntBASIC10.61□□□□□ -0.71
SgcbP82349 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC10.61□□□□□ -0.71
SgcbP82349 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.61□□□□□ -0.71
SgcbP82349 Gm2553-201ENSMUST00000215986 605 ntBASIC10.61□□□□□ -0.71
SgcbP82349 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC10.61□□□□□ -0.71
SgcbP82349 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcbP82349 Gm5705-201ENSMUST00000066241 711 ntBASIC10.61□□□□□ -0.71
SgcbP82349 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcbP82349 Gm7114-201ENSMUST00000190159 1789 ntBASIC10.61□□□□□ -0.71
SgcbP82349 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
SgcbP82349 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcbP82349 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcbP82349 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcbP82349 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
SgcbP82349 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.61□□□□□ -0.71
SgcbP82349 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcbP82349 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SgcbP82349 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcbP82349 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
SgcbP82349 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
SgcbP82349 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SgcbP82349 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SgcbP82349 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SgcbP82349 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SgcbP82349 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.6□□□□□ -0.71
SgcbP82349 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
SgcbP82349 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.6□□□□□ -0.71
SgcbP82349 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SgcbP82349 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SgcbP82349 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
SgcbP82349 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SgcbP82349 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SgcbP82349 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
SgcbP82349 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SgcbP82349 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
SgcbP82349 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SgcbP82349 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
SgcbP82349 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SgcbP82349 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.6□□□□□ -0.71
SgcbP82349 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SgcbP82349 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SgcbP82349 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
SgcbP82349 AC117194.1-201ENSMUST00000224847 3002 ntBASIC10.6□□□□□ -0.71
SgcbP82349 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SgcbP82349 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.6□□□□□ -0.71
SgcbP82349 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
SgcbP82349 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC10.6□□□□□ -0.71
SgcbP82349 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10.6□□□□□ -0.71
SgcbP82349 Gm7857-201ENSMUST00000117957 358 ntBASIC10.6□□□□□ -0.71
SgcbP82349 Gm12036-201ENSMUST00000120008 530 ntBASIC10.6□□□□□ -0.71
SgcbP82349 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC10.6□□□□□ -0.71
SgcbP82349 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SgcbP82349 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
SgcbP82349 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
SgcbP82349 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SgcbP82349 Gm8343-201ENSMUST00000182705 994 ntBASIC10.6□□□□□ -0.71
SgcbP82349 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SgcbP82349 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SgcbP82349 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC10.6□□□□□ -0.71
SgcbP82349 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.6□□□□□ -0.71
SgcbP82349 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC10.6□□□□□ -0.71
SgcbP82349 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
SgcbP82349 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SgcbP82349 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SgcbP82349 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.6□□□□□ -0.71
SgcbP82349 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SgcbP82349 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
SgcbP82349 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SgcbP82349 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
SgcbP82349 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
SgcbP82349 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
SgcbP82349 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SgcbP82349 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SgcbP82349 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SgcbP82349 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.6□□□□□ -0.71
SgcbP82349 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SgcbP82349 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.6□□□□□ -0.71
SgcbP82349 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SgcbP82349 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SgcbP82349 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SgcbP82349 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SgcbP82349 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SgcbP82349 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SgcbP82349 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
SgcbP82349 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SgcbP82349 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SgcbP82349 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms