Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shox2P70390 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Shox2P70390 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Shox2P70390 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Shox2P70390 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shox2P70390 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shox2P70390 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shox2P70390 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Shox2P70390 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shox2P70390 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shox2P70390 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shox2P70390 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shox2P70390 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shox2P70390 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.67□□□□□ -0.54
Shox2P70390 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shox2P70390 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.67□□□□□ -0.54
Shox2P70390 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shox2P70390 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shox2P70390 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shox2P70390 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shox2P70390 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shox2P70390 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shox2P70390 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shox2P70390 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shox2P70390 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Shox2P70390 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Shox2P70390 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Shox2P70390 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shox2P70390 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Shox2P70390 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.66□□□□□ -0.54
Shox2P70390 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Shox2P70390 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.66□□□□□ -0.54
Shox2P70390 Gm11803-201ENSMUST00000119966 444 ntBASIC11.66□□□□□ -0.54
Shox2P70390 Gm13616-201ENSMUST00000120600 222 ntBASIC11.66□□□□□ -0.54
Shox2P70390 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC11.66□□□□□ -0.54
Shox2P70390 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Shox2P70390 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Shox2P70390 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Shox2P70390 Gm8810-201ENSMUST00000172895 754 ntBASIC11.66□□□□□ -0.54
Shox2P70390 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.66□□□□□ -0.54
Shox2P70390 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Shox2P70390 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.66□□□□□ -0.54
Shox2P70390 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shox2P70390 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.66□□□□□ -0.54
Shox2P70390 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shox2P70390 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shox2P70390 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shox2P70390 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Shox2P70390 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.66□□□□□ -0.54
Shox2P70390 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC11.66□□□□□ -0.54
Shox2P70390 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shox2P70390 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shox2P70390 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Shox2P70390 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Shox2P70390 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.66□□□□□ -0.54
Shox2P70390 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shox2P70390 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shox2P70390 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Shox2P70390 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shox2P70390 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Shox2P70390 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shox2P70390 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC11.66□□□□□ -0.54
Shox2P70390 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Shox2P70390 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shox2P70390 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.65□□□□□ -0.54
Shox2P70390 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shox2P70390 Gm37031-201ENSMUST00000195487 2530 ntBASIC11.65□□□□□ -0.54
Shox2P70390 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shox2P70390 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.65□□□□□ -0.54
Shox2P70390 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Shox2P70390 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Shox2P70390 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Shox2P70390 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shox2P70390 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Shox2P70390 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shox2P70390 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Shox2P70390 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shox2P70390 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shox2P70390 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shox2P70390 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Shox2P70390 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Shox2P70390 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Shox2P70390 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Shox2P70390 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.65□□□□□ -0.54
Shox2P70390 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Shox2P70390 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shox2P70390 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Shox2P70390 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.65□□□□□ -0.54
Shox2P70390 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Shox2P70390 Mir8102-201ENSMUST00000184148 139 ntBASIC11.65□□□□□ -0.54
Shox2P70390 Gm5370-201ENSMUST00000187187 574 ntBASIC11.65□□□□□ -0.54
Shox2P70390 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.65□□□□□ -0.54
Shox2P70390 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC11.65□□□□□ -0.54
Shox2P70390 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.65□□□□□ -0.54
Shox2P70390 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.65□□□□□ -0.54
Shox2P70390 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shox2P70390 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shox2P70390 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shox2P70390 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shox2P70390 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms