Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.07□□□□□ -0.32
Hmgb1P63158 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.07□□□□□ -0.32
Hmgb1P63158 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Hmgb1P63158 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.07□□□□□ -0.32
Hmgb1P63158 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.07□□□□□ -0.32
Hmgb1P63158 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.07□□□□□ -0.32
Hmgb1P63158 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC13.07□□□□□ -0.32
Hmgb1P63158 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.07□□□□□ -0.32
Hmgb1P63158 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hmgb1P63158 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hmgb1P63158 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Hmgb1P63158 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hmgb1P63158 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC13.07□□□□□ -0.32
Hmgb1P63158 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hmgb1P63158 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hmgb1P63158 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Hmgb1P63158 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hmgb1P63158 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hmgb1P63158 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hmgb1P63158 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hmgb1P63158 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Hmgb1P63158 Gm5766-201ENSMUST00000160520 1977 ntBASIC13.07□□□□□ -0.32
Hmgb1P63158 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hmgb1P63158 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hmgb1P63158 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmgb1P63158 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmgb1P63158 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmgb1P63158 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmgb1P63158 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC13.06□□□□□ -0.32
Hmgb1P63158 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmgb1P63158 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmgb1P63158 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmgb1P63158 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.06□□□□□ -0.32
Hmgb1P63158 AC167022.1-201ENSMUST00000218647 1458 ntBASIC13.06□□□□□ -0.32
Hmgb1P63158 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Hmgb1P63158 Adamdec1-201ENSMUST00000022641 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmgb1P63158 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Hmgb1P63158 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.06□□□□□ -0.32
Hmgb1P63158 Gm11930-201ENSMUST00000117788 190 ntBASIC13.06□□□□□ -0.32
Hmgb1P63158 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Hmgb1P63158 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.06□□□□□ -0.32
Hmgb1P63158 Gm31256-201ENSMUST00000194705 506 ntBASIC13.06□□□□□ -0.32
Hmgb1P63158 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.06□□□□□ -0.32
Hmgb1P63158 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmgb1P63158 Gm19187-201ENSMUST00000206781 892 ntBASIC13.06□□□□□ -0.32
Hmgb1P63158 CT571245.2-201ENSMUST00000218421 305 ntBASIC13.06□□□□□ -0.32
Hmgb1P63158 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmgb1P63158 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmgb1P63158 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Hmgb1P63158 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmgb1P63158 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmgb1P63158 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmgb1P63158 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmgb1P63158 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Hmgb1P63158 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.06□□□□□ -0.32
Hmgb1P63158 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Hmgb1P63158 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Hmgb1P63158 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmgb1P63158 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Hmgb1P63158 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmgb1P63158 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Hmgb1P63158 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmgb1P63158 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC13.06□□□□□ -0.32
Hmgb1P63158 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmgb1P63158 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC13.06□□□□□ -0.32
Hmgb1P63158 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hmgb1P63158 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Hmgb1P63158 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC13.05□□□□□ -0.32
Hmgb1P63158 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Hmgb1P63158 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Hmgb1P63158 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hmgb1P63158 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Hmgb1P63158 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC13.05□□□□□ -0.32
Hmgb1P63158 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hmgb1P63158 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hmgb1P63158 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hmgb1P63158 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hmgb1P63158 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.05□□□□□ -0.32
Hmgb1P63158 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hmgb1P63158 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Hmgb1P63158 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Hmgb1P63158 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Hmgb1P63158 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Hmgb1P63158 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Hmgb1P63158 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Hmgb1P63158 Gm11511-201ENSMUST00000118146 540 ntBASIC13.05□□□□□ -0.32
Hmgb1P63158 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hmgb1P63158 Gm11700-201ENSMUST00000119409 403 ntBASIC13.05□□□□□ -0.32
Hmgb1P63158 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hmgb1P63158 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.05□□□□□ -0.32
Hmgb1P63158 Gm6963-201ENSMUST00000147879 379 ntBASIC13.05□□□□□ -0.32
Hmgb1P63158 Gm27501-201ENSMUST00000183599 107 ntBASIC13.05□□□□□ -0.32
Hmgb1P63158 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.05□□□□□ -0.32
Hmgb1P63158 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC13.05□□□□□ -0.32
Hmgb1P63158 Gm21769-201ENSMUST00000211922 111 ntBASIC13.05□□□□□ -0.32
Hmgb1P63158 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.05□□□□□ -0.32
Hmgb1P63158 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.05□□□□□ -0.32
Hmgb1P63158 Gm10478-201ENSMUST00000084451 396 ntBASIC13.05□□□□□ -0.32
Hmgb1P63158 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Hmgb1P63158 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms