Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Crnkl1P63154 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Crnkl1P63154 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Crnkl1P63154 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Crnkl1P63154 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.73□□□□□ -0.53
Crnkl1P63154 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Crnkl1P63154 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Crnkl1P63154 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Crnkl1P63154 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Crnkl1P63154 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Crnkl1P63154 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Crnkl1P63154 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Crnkl1P63154 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Crnkl1P63154 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Crnkl1P63154 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Crnkl1P63154 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Crnkl1P63154 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Crnkl1P63154 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Crnkl1P63154 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Crnkl1P63154 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.72□□□□□ -0.53
Crnkl1P63154 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Crnkl1P63154 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Crnkl1P63154 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
Crnkl1P63154 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Crnkl1P63154 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Crnkl1P63154 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Crnkl1P63154 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Crnkl1P63154 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Crnkl1P63154 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.72□□□□□ -0.53
Crnkl1P63154 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Crnkl1P63154 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Crnkl1P63154 Gm16479-201ENSMUST00000121706 932 ntBASIC11.72□□□□□ -0.53
Crnkl1P63154 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.72□□□□□ -0.53
Crnkl1P63154 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Crnkl1P63154 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.72□□□□□ -0.53
Crnkl1P63154 Gm27682-201ENSMUST00000183930 110 ntBASIC11.72□□□□□ -0.53
Crnkl1P63154 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.72□□□□□ -0.53
Crnkl1P63154 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.72□□□□□ -0.53
Crnkl1P63154 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.72□□□□□ -0.53
Crnkl1P63154 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.72□□□□□ -0.53
Crnkl1P63154 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Crnkl1P63154 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Crnkl1P63154 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.72□□□□□ -0.53
Crnkl1P63154 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.72□□□□□ -0.53
Crnkl1P63154 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Crnkl1P63154 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Crnkl1P63154 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Crnkl1P63154 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Crnkl1P63154 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Crnkl1P63154 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Crnkl1P63154 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Crnkl1P63154 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Crnkl1P63154 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Crnkl1P63154 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC11.72□□□□□ -0.53
Crnkl1P63154 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Crnkl1P63154 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Crnkl1P63154 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Crnkl1P63154 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.71□□□□□ -0.53
Crnkl1P63154 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Crnkl1P63154 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Crnkl1P63154 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Crnkl1P63154 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Crnkl1P63154 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Crnkl1P63154 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Crnkl1P63154 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Crnkl1P63154 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Crnkl1P63154 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Crnkl1P63154 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Crnkl1P63154 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Crnkl1P63154 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.71□□□□□ -0.53
Crnkl1P63154 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.71□□□□□ -0.53
Crnkl1P63154 Gm12036-201ENSMUST00000120008 530 ntBASIC11.71□□□□□ -0.53
Crnkl1P63154 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Crnkl1P63154 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.71□□□□□ -0.53
Crnkl1P63154 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.71□□□□□ -0.53
Crnkl1P63154 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Crnkl1P63154 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Crnkl1P63154 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Crnkl1P63154 Gm26927-201ENSMUST00000182385 965 ntBASIC11.71□□□□□ -0.53
Crnkl1P63154 Gm5370-201ENSMUST00000187187 574 ntBASIC11.71□□□□□ -0.53
Crnkl1P63154 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Crnkl1P63154 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Crnkl1P63154 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.71□□□□□ -0.53
Crnkl1P63154 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Crnkl1P63154 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Crnkl1P63154 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Crnkl1P63154 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Crnkl1P63154 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.71□□□□□ -0.54
Crnkl1P63154 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Crnkl1P63154 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Crnkl1P63154 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.54
Crnkl1P63154 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Crnkl1P63154 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Crnkl1P63154 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC11.71□□□□□ -0.54
Crnkl1P63154 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Crnkl1P63154 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Crnkl1P63154 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Crnkl1P63154 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Crnkl1P63154 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Crnkl1P63154 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms