Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm3150-201ENSMUST00000166418 204 ntBASIC12.14□□□□□ -0.47
Ybx1P62960 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.14□□□□□ -0.47
Ybx1P62960 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.14□□□□□ -0.47
Ybx1P62960 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.14□□□□□ -0.47
Ybx1P62960 Gm12407-201ENSMUST00000180219 324 ntBASIC12.14□□□□□ -0.47
Ybx1P62960 Gm19166-201ENSMUST00000196041 1063 ntBASIC12.14□□□□□ -0.47
Ybx1P62960 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ybx1P62960 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.14□□□□□ -0.47
Ybx1P62960 Gm44506-201ENSMUST00000206278 965 ntBASIC12.14□□□□□ -0.47
Ybx1P62960 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ybx1P62960 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.14□□□□□ -0.47
Ybx1P62960 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.14□□□□□ -0.47
Ybx1P62960 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ybx1P62960 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ybx1P62960 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ybx1P62960 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ybx1P62960 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ybx1P62960 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.14□□□□□ -0.47
Ybx1P62960 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ybx1P62960 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ybx1P62960 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ybx1P62960 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.13□□□□□ -0.47
Ybx1P62960 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ybx1P62960 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ybx1P62960 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.13□□□□□ -0.47
Ybx1P62960 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ybx1P62960 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Ybx1P62960 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Ybx1P62960 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ybx1P62960 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ybx1P62960 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ybx1P62960 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Ybx1P62960 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ybx1P62960 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ybx1P62960 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ybx1P62960 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ybx1P62960 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ybx1P62960 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ybx1P62960 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ybx1P62960 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ybx1P62960 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ybx1P62960 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.13□□□□□ -0.47
Ybx1P62960 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ybx1P62960 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.13□□□□□ -0.47
Ybx1P62960 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.13□□□□□ -0.47
Ybx1P62960 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.13□□□□□ -0.47
Ybx1P62960 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Ybx1P62960 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ybx1P62960 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ybx1P62960 Gm3671-201ENSMUST00000182463 1007 ntBASIC12.13□□□□□ -0.47
Ybx1P62960 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.13□□□□□ -0.47
Ybx1P62960 Gm3551-201ENSMUST00000190750 664 ntBASIC12.13□□□□□ -0.47
Ybx1P62960 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ybx1P62960 Gm44158-201ENSMUST00000203881 505 ntBASIC12.13□□□□□ -0.47
Ybx1P62960 Gm45113-201ENSMUST00000207518 165 ntBASIC12.13□□□□□ -0.47
Ybx1P62960 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.13□□□□□ -0.47
Ybx1P62960 Gm2553-201ENSMUST00000215986 605 ntBASIC12.13□□□□□ -0.47
Ybx1P62960 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.13□□□□□ -0.47
Ybx1P62960 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.13□□□□□ -0.47
Ybx1P62960 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ybx1P62960 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ybx1P62960 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ybx1P62960 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.13□□□□□ -0.47
Ybx1P62960 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ybx1P62960 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ybx1P62960 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ybx1P62960 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ybx1P62960 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ybx1P62960 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ybx1P62960 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ybx1P62960 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ybx1P62960 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ybx1P62960 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ybx1P62960 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ybx1P62960 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.13□□□□□ -0.47
Ybx1P62960 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ybx1P62960 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ybx1P62960 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ybx1P62960 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ybx1P62960 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.12□□□□□ -0.47
Ybx1P62960 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ybx1P62960 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ybx1P62960 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ybx1P62960 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ybx1P62960 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ybx1P62960 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ybx1P62960 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Ybx1P62960 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ybx1P62960 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ybx1P62960 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ybx1P62960 Gm26013-201ENSMUST00000104404 119 ntBASIC12.12□□□□□ -0.47
Ybx1P62960 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ybx1P62960 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.12□□□□□ -0.47
Ybx1P62960 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ybx1P62960 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ybx1P62960 Gm12419-201ENSMUST00000116649 636 ntBASIC12.12□□□□□ -0.47
Ybx1P62960 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ybx1P62960 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.12□□□□□ -0.47
Ybx1P62960 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ybx1P62960 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms