Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
Sec61a1P61620 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sec61a1P61620 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sec61a1P61620 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Sec61a1P61620 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sec61a1P61620 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
Sec61a1P61620 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Sec61a1P61620 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sec61a1P61620 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.74
Sec61a1P61620 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Sec61a1P61620 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Sec61a1P61620 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.46□□□□□ -0.74
Sec61a1P61620 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sec61a1P61620 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sec61a1P61620 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sec61a1P61620 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sec61a1P61620 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sec61a1P61620 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.45□□□□□ -0.74
Sec61a1P61620 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.45□□□□□ -0.74
Sec61a1P61620 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Sec61a1P61620 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
Sec61a1P61620 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.45□□□□□ -0.74
Sec61a1P61620 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC10.45□□□□□ -0.74
Sec61a1P61620 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 Gm22323-201ENSMUST00000103832 109 ntBASIC10.45□□□□□ -0.74
Sec61a1P61620 Gm25214-201ENSMUST00000104573 129 ntBASIC10.45□□□□□ -0.74
Sec61a1P61620 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Sec61a1P61620 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.45□□□□□ -0.74
Sec61a1P61620 Gm11531-201ENSMUST00000117614 555 ntBASIC10.45□□□□□ -0.74
Sec61a1P61620 Gm5863-201ENSMUST00000121760 1008 ntBASIC10.45□□□□□ -0.74
Sec61a1P61620 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC10.45□□□□□ -0.74
Sec61a1P61620 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.45□□□□□ -0.74
Sec61a1P61620 Gm26083-201ENSMUST00000157904 193 ntBASIC10.45□□□□□ -0.74
Sec61a1P61620 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 Gm16296-201ENSMUST00000159905 325 ntBASIC10.45□□□□□ -0.74
Sec61a1P61620 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.45□□□□□ -0.74
Sec61a1P61620 Gm21769-201ENSMUST00000211922 111 ntBASIC10.45□□□□□ -0.74
Sec61a1P61620 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.45□□□□□ -0.74
Sec61a1P61620 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Sec61a1P61620 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Sec61a1P61620 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Sec61a1P61620 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Sec61a1P61620 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Sec61a1P61620 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.45□□□□□ -0.74
Sec61a1P61620 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.45□□□□□ -0.74
Sec61a1P61620 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sec61a1P61620 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.45□□□□□ -0.74
Sec61a1P61620 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.44□□□□□ -0.74
Sec61a1P61620 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a1P61620 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a1P61620 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a1P61620 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Sec61a1P61620 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.44□□□□□ -0.74
Sec61a1P61620 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a1P61620 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a1P61620 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a1P61620 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a1P61620 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a1P61620 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a1P61620 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.44□□□□□ -0.74
Sec61a1P61620 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sec61a1P61620 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.44□□□□□ -0.74
Sec61a1P61620 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.44□□□□□ -0.74
Sec61a1P61620 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Sec61a1P61620 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.44□□□□□ -0.74
Sec61a1P61620 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms