Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.44□□□□□ -0.42
NcanP55066 Gm25562-201ENSMUST00000104608 133 ntBASIC12.44□□□□□ -0.42
NcanP55066 Gm15625-201ENSMUST00000117617 1093 ntBASIC12.44□□□□□ -0.42
NcanP55066 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NcanP55066 Gm4943-201ENSMUST00000132879 424 ntBASIC12.44□□□□□ -0.42
NcanP55066 Gm16441-201ENSMUST00000138176 924 ntBASIC12.44□□□□□ -0.42
NcanP55066 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NcanP55066 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NcanP55066 Gm24294-201ENSMUST00000158295 277 ntBASIC12.44□□□□□ -0.42
NcanP55066 Gm17221-201ENSMUST00000163909 481 ntBASIC12.44□□□□□ -0.42
NcanP55066 Gm17073-201ENSMUST00000168069 556 ntBASIC12.44□□□□□ -0.42
NcanP55066 Mir7035-201ENSMUST00000184713 82 ntBASIC12.44□□□□□ -0.42
NcanP55066 Mir8093-201ENSMUST00000185043 137 ntBASIC12.44□□□□□ -0.42
NcanP55066 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NcanP55066 Gm5267-201ENSMUST00000191574 1045 ntBASIC12.44□□□□□ -0.42
NcanP55066 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
NcanP55066 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NcanP55066 Rps3a2-201ENSMUST00000074245 792 ntBASIC12.44□□□□□ -0.42
NcanP55066 Rps3a3-201ENSMUST00000074680 795 ntBASIC12.44□□□□□ -0.42
NcanP55066 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.44□□□□□ -0.42
NcanP55066 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NcanP55066 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.44□□□□□ -0.42
NcanP55066 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.44□□□□□ -0.42
NcanP55066 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NcanP55066 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NcanP55066 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NcanP55066 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NcanP55066 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NcanP55066 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NcanP55066 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
NcanP55066 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NcanP55066 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NcanP55066 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NcanP55066 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
NcanP55066 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NcanP55066 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NcanP55066 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
NcanP55066 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NcanP55066 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NcanP55066 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NcanP55066 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.43□□□□□ -0.42
NcanP55066 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.43□□□□□ -0.42
NcanP55066 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NcanP55066 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.43□□□□□ -0.42
NcanP55066 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NcanP55066 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NcanP55066 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.43□□□□□ -0.42
NcanP55066 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
NcanP55066 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NcanP55066 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NcanP55066 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC12.43□□□□□ -0.42
NcanP55066 Gm15329-201ENSMUST00000121408 155 ntBASIC12.43□□□□□ -0.42
NcanP55066 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
NcanP55066 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NcanP55066 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NcanP55066 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NcanP55066 Gm38135-201ENSMUST00000195068 502 ntBASIC12.43□□□□□ -0.42
NcanP55066 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC12.43□□□□□ -0.42
NcanP55066 AC134248.1-201ENSMUST00000216113 1176 ntBASIC12.43□□□□□ -0.42
NcanP55066 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC12.43□□□□□ -0.42
NcanP55066 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
NcanP55066 Gm4978-201ENSMUST00000071565 801 ntBASIC12.43□□□□□ -0.42
NcanP55066 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC12.43□□□□□ -0.42
NcanP55066 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
NcanP55066 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
NcanP55066 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NcanP55066 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NcanP55066 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NcanP55066 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NcanP55066 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NcanP55066 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NcanP55066 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
NcanP55066 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NcanP55066 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
NcanP55066 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NcanP55066 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.43□□□□□ -0.42
NcanP55066 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NcanP55066 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NcanP55066 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
NcanP55066 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
NcanP55066 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.42□□□□□ -0.42
NcanP55066 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NcanP55066 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
NcanP55066 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NcanP55066 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
NcanP55066 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NcanP55066 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.42□□□□□ -0.42
NcanP55066 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NcanP55066 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NcanP55066 Mir453-201ENSMUST00000104732 82 ntBASIC12.42□□□□□ -0.42
NcanP55066 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NcanP55066 4933428M09Rik-201ENSMUST00000113046 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NcanP55066 Gm12418-201ENSMUST00000118116 942 ntBASIC12.42□□□□□ -0.42
NcanP55066 Gm11544-201ENSMUST00000120215 382 ntBASIC12.42□□□□□ -0.42
NcanP55066 Gm15746-201ENSMUST00000120684 1027 ntBASIC12.42□□□□□ -0.42
NcanP55066 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC12.42□□□□□ -0.42
NcanP55066 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NcanP55066 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NcanP55066 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NcanP55066 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms