Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Gm1848-201ENSMUST00000120711 789 ntBASIC12.62□□□□□ -0.39
NrlP54846 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NrlP54846 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NrlP54846 Gm6485-201ENSMUST00000160676 439 ntBASIC12.62□□□□□ -0.39
NrlP54846 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
NrlP54846 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
NrlP54846 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NrlP54846 Gm5714-201ENSMUST00000197343 566 ntBASIC12.62□□□□□ -0.39
NrlP54846 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.62□□□□□ -0.39
NrlP54846 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.62□□□□□ -0.39
NrlP54846 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.62□□□□□ -0.39
NrlP54846 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
NrlP54846 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NrlP54846 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NrlP54846 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NrlP54846 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
NrlP54846 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
NrlP54846 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NrlP54846 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.62□□□□□ -0.39
NrlP54846 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
NrlP54846 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NrlP54846 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.62□□□□□ -0.39
NrlP54846 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.62□□□□□ -0.39
NrlP54846 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NrlP54846 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
NrlP54846 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NrlP54846 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NrlP54846 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NrlP54846 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
NrlP54846 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.61□□□□□ -0.39
NrlP54846 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NrlP54846 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NrlP54846 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NrlP54846 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
NrlP54846 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NrlP54846 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NrlP54846 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.61□□□□□ -0.39
NrlP54846 Gm16071-201ENSMUST00000119589 793 ntBASIC12.61□□□□□ -0.39
NrlP54846 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12.61□□□□□ -0.39
NrlP54846 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.61□□□□□ -0.39
NrlP54846 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
NrlP54846 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.61□□□□□ -0.39
NrlP54846 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC12.61□□□□□ -0.39
NrlP54846 Gm8492-201ENSMUST00000182375 987 ntBASIC12.61□□□□□ -0.39
NrlP54846 Gm4654-201ENSMUST00000183305 982 ntBASIC12.61□□□□□ -0.39
NrlP54846 Gm17826-201ENSMUST00000189720 798 ntBASIC12.61□□□□□ -0.39
NrlP54846 Gm42518-201ENSMUST00000196277 938 ntBASIC12.61□□□□□ -0.39
NrlP54846 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NrlP54846 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NrlP54846 Gm2553-201ENSMUST00000215986 605 ntBASIC12.61□□□□□ -0.39
NrlP54846 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.61□□□□□ -0.39
NrlP54846 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NrlP54846 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NrlP54846 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.61□□□□□ -0.39
NrlP54846 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NrlP54846 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NrlP54846 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.61□□□□□ -0.39
NrlP54846 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.61□□□□□ -0.39
NrlP54846 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NrlP54846 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
NrlP54846 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.61□□□□□ -0.39
NrlP54846 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
NrlP54846 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
NrlP54846 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NrlP54846 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NrlP54846 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.61□□□□□ -0.39
NrlP54846 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.61□□□□□ -0.39
NrlP54846 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
NrlP54846 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NrlP54846 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
NrlP54846 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.61□□□□□ -0.39
NrlP54846 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NrlP54846 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.6□□□□□ -0.39
NrlP54846 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NrlP54846 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NrlP54846 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NrlP54846 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NrlP54846 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NrlP54846 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
NrlP54846 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NrlP54846 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
NrlP54846 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.6□□□□□ -0.39
NrlP54846 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NrlP54846 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NrlP54846 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NrlP54846 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
NrlP54846 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.6□□□□□ -0.39
NrlP54846 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NrlP54846 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.6□□□□□ -0.39
NrlP54846 Gm11675-201ENSMUST00000121873 832 ntBASIC12.6□□□□□ -0.39
NrlP54846 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NrlP54846 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.6□□□□□ -0.39
NrlP54846 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NrlP54846 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NrlP54846 Gm4310-201ENSMUST00000177847 889 ntBASIC12.6□□□□□ -0.39
NrlP54846 Gm21092-201ENSMUST00000178995 955 ntBASIC12.6□□□□□ -0.39
NrlP54846 Mir6998-201ENSMUST00000183343 64 ntBASIC12.6□□□□□ -0.39
NrlP54846 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.6□□□□□ -0.39
NrlP54846 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.6□□□□□ -0.39
NrlP54846 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms