Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdx1P52946 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdx1P52946 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pdx1P52946 Gm23200-201ENSMUST00000104379 132 ntBASIC11.7□□□□□ -0.54
Pdx1P52946 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Pdx1P52946 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.7□□□□□ -0.54
Pdx1P52946 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.7□□□□□ -0.54
Pdx1P52946 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdx1P52946 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Pdx1P52946 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.7□□□□□ -0.54
Pdx1P52946 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pdx1P52946 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.7□□□□□ -0.54
Pdx1P52946 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdx1P52946 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pdx1P52946 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pdx1P52946 Gm27552-201ENSMUST00000183351 62 ntBASIC11.7□□□□□ -0.54
Pdx1P52946 Gm27844-201ENSMUST00000183613 62 ntBASIC11.7□□□□□ -0.54
Pdx1P52946 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.7□□□□□ -0.54
Pdx1P52946 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdx1P52946 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdx1P52946 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Pdx1P52946 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.7□□□□□ -0.54
Pdx1P52946 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdx1P52946 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pdx1P52946 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pdx1P52946 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdx1P52946 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.7□□□□□ -0.54
Pdx1P52946 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pdx1P52946 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdx1P52946 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pdx1P52946 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdx1P52946 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdx1P52946 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.7□□□□□ -0.54
Pdx1P52946 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Pdx1P52946 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdx1P52946 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdx1P52946 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdx1P52946 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdx1P52946 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pdx1P52946 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pdx1P52946 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.7□□□□□ -0.54
Pdx1P52946 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdx1P52946 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.69□□□□□ -0.54
Pdx1P52946 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdx1P52946 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdx1P52946 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pdx1P52946 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.69□□□□□ -0.54
Pdx1P52946 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdx1P52946 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdx1P52946 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdx1P52946 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pdx1P52946 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pdx1P52946 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdx1P52946 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdx1P52946 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdx1P52946 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdx1P52946 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdx1P52946 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdx1P52946 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Pdx1P52946 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.69□□□□□ -0.54
Pdx1P52946 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.69□□□□□ -0.54
Pdx1P52946 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.69□□□□□ -0.54
Pdx1P52946 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.69□□□□□ -0.54
Pdx1P52946 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Pdx1P52946 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Pdx1P52946 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.69□□□□□ -0.54
Pdx1P52946 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.69□□□□□ -0.54
Pdx1P52946 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.69□□□□□ -0.54
Pdx1P52946 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.69□□□□□ -0.54
Pdx1P52946 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.69□□□□□ -0.54
Pdx1P52946 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Pdx1P52946 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.69□□□□□ -0.54
Pdx1P52946 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.69□□□□□ -0.54
Pdx1P52946 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdx1P52946 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Pdx1P52946 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdx1P52946 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdx1P52946 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.69□□□□□ -0.54
Pdx1P52946 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Pdx1P52946 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdx1P52946 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdx1P52946 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdx1P52946 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pdx1P52946 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdx1P52946 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Pdx1P52946 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdx1P52946 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pdx1P52946 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdx1P52946 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pdx1P52946 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdx1P52946 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pdx1P52946 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdx1P52946 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdx1P52946 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdx1P52946 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdx1P52946 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdx1P52946 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pdx1P52946 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pdx1P52946 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdx1P52946 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms