Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rfx3P48381 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rfx3P48381 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Rfx3P48381 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rfx3P48381 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Rfx3P48381 Gm9996-201ENSMUST00000070359 913 ntBASIC10.71□□□□□ -0.69
Rfx3P48381 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Rfx3P48381 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Rfx3P48381 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Rfx3P48381 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Rfx3P48381 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Rfx3P48381 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Rfx3P48381 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Rfx3P48381 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfx3P48381 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfx3P48381 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfx3P48381 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.7□□□□□ -0.7
Rfx3P48381 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Rfx3P48381 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.7□□□□□ -0.7
Rfx3P48381 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfx3P48381 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfx3P48381 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Rfx3P48381 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfx3P48381 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Rfx3P48381 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfx3P48381 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.7□□□□□ -0.7
Rfx3P48381 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfx3P48381 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Rfx3P48381 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfx3P48381 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.7□□□□□ -0.7
Rfx3P48381 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfx3P48381 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Rfx3P48381 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Rfx3P48381 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.7□□□□□ -0.7
Rfx3P48381 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfx3P48381 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.7□□□□□ -0.7
Rfx3P48381 Gm14832-201ENSMUST00000121289 322 ntBASIC10.7□□□□□ -0.7
Rfx3P48381 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Rfx3P48381 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Rfx3P48381 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC10.7□□□□□ -0.7
Rfx3P48381 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.7□□□□□ -0.7
Rfx3P48381 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.7□□□□□ -0.7
Rfx3P48381 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.7□□□□□ -0.7
Rfx3P48381 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Rfx3P48381 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.7□□□□□ -0.7
Rfx3P48381 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Rfx3P48381 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.7□□□□□ -0.7
Rfx3P48381 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfx3P48381 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfx3P48381 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfx3P48381 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Rfx3P48381 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfx3P48381 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfx3P48381 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.7□□□□□ -0.7
Rfx3P48381 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfx3P48381 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Rfx3P48381 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfx3P48381 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Rfx3P48381 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.7□□□□□ -0.7
Rfx3P48381 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfx3P48381 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfx3P48381 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfx3P48381 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfx3P48381 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfx3P48381 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfx3P48381 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfx3P48381 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfx3P48381 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfx3P48381 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfx3P48381 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfx3P48381 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
Rfx3P48381 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.69□□□□□ -0.7
Rfx3P48381 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Rfx3P48381 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfx3P48381 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfx3P48381 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfx3P48381 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfx3P48381 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
Rfx3P48381 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rfx3P48381 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfx3P48381 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.69□□□□□ -0.7
Rfx3P48381 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.69□□□□□ -0.7
Rfx3P48381 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfx3P48381 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfx3P48381 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfx3P48381 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfx3P48381 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfx3P48381 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfx3P48381 Gm12241-201ENSMUST00000118330 726 ntBASIC10.69□□□□□ -0.7
Rfx3P48381 Gm24845-201ENSMUST00000158034 109 ntBASIC10.69□□□□□ -0.7
Rfx3P48381 Rprl1-201ENSMUST00000158050 327 ntBASIC10.69□□□□□ -0.7
Rfx3P48381 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rfx3P48381 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.69□□□□□ -0.7
Rfx3P48381 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.69□□□□□ -0.7
Rfx3P48381 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rfx3P48381 Gm3961-201ENSMUST00000204425 994 ntBASIC10.69□□□□□ -0.7
Rfx3P48381 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rfx3P48381 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.69□□□□□ -0.7
Rfx3P48381 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.69□□□□□ -0.7
Rfx3P48381 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms