Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.14□□□□□ -0.63
Sox6P40645 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox6P40645 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox6P40645 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox6P40645 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox6P40645 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Sox6P40645 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox6P40645 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox6P40645 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox6P40645 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox6P40645 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox6P40645 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Sox6P40645 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox6P40645 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox6P40645 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox6P40645 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.14□□□□□ -0.63
Sox6P40645 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Sox6P40645 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox6P40645 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox6P40645 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox6P40645 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.13□□□□□ -0.63
Sox6P40645 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox6P40645 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.13□□□□□ -0.63
Sox6P40645 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox6P40645 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox6P40645 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox6P40645 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox6P40645 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
Sox6P40645 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Sox6P40645 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox6P40645 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox6P40645 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox6P40645 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.13□□□□□ -0.63
Sox6P40645 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox6P40645 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox6P40645 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox6P40645 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.13□□□□□ -0.63
Sox6P40645 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox6P40645 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.13□□□□□ -0.63
Sox6P40645 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.13□□□□□ -0.63
Sox6P40645 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.13□□□□□ -0.63
Sox6P40645 Gm3961-201ENSMUST00000204425 994 ntBASIC11.13□□□□□ -0.63
Sox6P40645 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.13□□□□□ -0.63
Sox6P40645 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox6P40645 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.13□□□□□ -0.63
Sox6P40645 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox6P40645 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox6P40645 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Sox6P40645 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox6P40645 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox6P40645 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox6P40645 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox6P40645 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox6P40645 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox6P40645 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Sox6P40645 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sox6P40645 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.13□□□□□ -0.63
Sox6P40645 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Sox6P40645 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox6P40645 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox6P40645 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sox6P40645 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Sox6P40645 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox6P40645 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox6P40645 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox6P40645 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.12□□□□□ -0.63
Sox6P40645 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox6P40645 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox6P40645 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox6P40645 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox6P40645 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox6P40645 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox6P40645 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Sox6P40645 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox6P40645 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox6P40645 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox6P40645 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Sox6P40645 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox6P40645 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.12□□□□□ -0.63
Sox6P40645 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Sox6P40645 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.12□□□□□ -0.63
Sox6P40645 Gm13570-201ENSMUST00000140763 309 ntBASIC11.12□□□□□ -0.63
Sox6P40645 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox6P40645 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox6P40645 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox6P40645 Gm25043-201ENSMUST00000158604 212 ntBASIC11.12□□□□□ -0.63
Sox6P40645 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Sox6P40645 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.12□□□□□ -0.63
Sox6P40645 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Sox6P40645 Gm6621-201ENSMUST00000193251 772 ntBASIC11.12□□□□□ -0.63
Sox6P40645 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.12□□□□□ -0.63
Sox6P40645 Gm43438-201ENSMUST00000198133 379 ntBASIC11.12□□□□□ -0.63
Sox6P40645 Gm43179-201ENSMUST00000198797 275 ntBASIC11.12□□□□□ -0.63
Sox6P40645 Gm6334-201ENSMUST00000207083 228 ntBASIC11.12□□□□□ -0.63
Sox6P40645 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox6P40645 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox6P40645 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox6P40645 Gm24136-201ENSMUST00000083374 165 ntBASIC11.12□□□□□ -0.63
Sox6P40645 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox6P40645 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms