Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Timp3P39876 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Timp3P39876 Gm5859-201ENSMUST00000165401 2324 ntBASIC9.77□□□□□ -0.85
Timp3P39876 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Timp3P39876 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Timp3P39876 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Timp3P39876 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Timp3P39876 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Timp3P39876 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Timp3P39876 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Timp3P39876 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Timp3P39876 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC9.77□□□□□ -0.85
Timp3P39876 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Timp3P39876 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Timp3P39876 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Timp3P39876 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Timp3P39876 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Timp3P39876 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
Timp3P39876 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Timp3P39876 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC9.76□□□□□ -0.85
Timp3P39876 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Timp3P39876 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Timp3P39876 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Timp3P39876 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Timp3P39876 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Timp3P39876 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Timp3P39876 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Timp3P39876 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Timp3P39876 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Timp3P39876 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Timp3P39876 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Timp3P39876 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Timp3P39876 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Timp3P39876 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Timp3P39876 Gm12201-201ENSMUST00000120657 1234 ntBASIC9.76□□□□□ -0.85
Timp3P39876 Gm14760-201ENSMUST00000121831 999 ntBASIC9.76□□□□□ -0.85
Timp3P39876 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC9.76□□□□□ -0.85
Timp3P39876 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC9.76□□□□□ -0.85
Timp3P39876 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC9.76□□□□□ -0.85
Timp3P39876 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Timp3P39876 Mir7677-201ENSMUST00000184226 67 ntBASIC9.76□□□□□ -0.85
Timp3P39876 Gm7003-201ENSMUST00000195089 312 ntBASIC9.76□□□□□ -0.85
Timp3P39876 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC9.76□□□□□ -0.85
Timp3P39876 Gm43962-201ENSMUST00000203898 190 ntBASIC9.76□□□□□ -0.85
Timp3P39876 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Timp3P39876 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC9.76□□□□□ -0.85
Timp3P39876 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Timp3P39876 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC9.76□□□□□ -0.85
Timp3P39876 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Timp3P39876 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC9.76□□□□□ -0.85
Timp3P39876 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Timp3P39876 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Timp3P39876 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Timp3P39876 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Timp3P39876 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Timp3P39876 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Timp3P39876 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Timp3P39876 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Timp3P39876 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC9.76□□□□□ -0.85
Timp3P39876 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Timp3P39876 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Timp3P39876 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Timp3P39876 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Timp3P39876 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Timp3P39876 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Timp3P39876 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Timp3P39876 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Timp3P39876 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Timp3P39876 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC9.76□□□□□ -0.85
Timp3P39876 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Timp3P39876 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC9.75□□□□□ -0.85
Timp3P39876 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Timp3P39876 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Timp3P39876 Gm5847-201ENSMUST00000178959 1595 ntBASIC9.75□□□□□ -0.85
Timp3P39876 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Timp3P39876 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC9.75□□□□□ -0.85
Timp3P39876 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Timp3P39876 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Timp3P39876 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Timp3P39876 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Timp3P39876 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Timp3P39876 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Timp3P39876 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC9.75□□□□□ -0.85
Timp3P39876 AC154517.2-201ENSMUST00000220829 2458 ntBASIC9.75□□□□□ -0.85
Timp3P39876 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Timp3P39876 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Timp3P39876 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Timp3P39876 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Timp3P39876 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Timp3P39876 Gm18227-201ENSMUST00000211082 1468 ntBASIC9.75□□□□□ -0.85
Timp3P39876 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Timp3P39876 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC9.75□□□□□ -0.85
Timp3P39876 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC9.75□□□□□ -0.85
Timp3P39876 Gm11331-201ENSMUST00000119764 288 ntBASIC9.75□□□□□ -0.85
Timp3P39876 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Timp3P39876 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC9.75□□□□□ -0.85
Timp3P39876 Gm3786-201ENSMUST00000202659 378 ntBASIC9.75□□□□□ -0.85
Timp3P39876 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Timp3P39876 Gm7848-201ENSMUST00000210739 718 ntBASIC9.75□□□□□ -0.85
Timp3P39876 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms