Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh4P39038 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh4P39038 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh4P39038 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh4P39038 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh4P39038 Gm26448-201ENSMUST00000082446 203 ntBASIC11.37□□□□□ -0.59
Cdh4P39038 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh4P39038 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh4P39038 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh4P39038 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh4P39038 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.37□□□□□ -0.59
Cdh4P39038 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.37□□□□□ -0.59
Cdh4P39038 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Cdh4P39038 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh4P39038 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh4P39038 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.37□□□□□ -0.59
Cdh4P39038 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Cdh4P39038 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh4P39038 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.37□□□□□ -0.59
Cdh4P39038 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Cdh4P39038 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.36□□□□□ -0.59
Cdh4P39038 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Cdh4P39038 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Cdh4P39038 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Cdh4P39038 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.36□□□□□ -0.59
Cdh4P39038 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh4P39038 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh4P39038 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh4P39038 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.36□□□□□ -0.59
Cdh4P39038 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh4P39038 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh4P39038 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh4P39038 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.36□□□□□ -0.59
Cdh4P39038 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cdh4P39038 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh4P39038 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh4P39038 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Cdh4P39038 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Cdh4P39038 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cdh4P39038 Gm7857-201ENSMUST00000117957 358 ntBASIC11.36□□□□□ -0.59
Cdh4P39038 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Cdh4P39038 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.36□□□□□ -0.59
Cdh4P39038 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.36□□□□□ -0.59
Cdh4P39038 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh4P39038 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh4P39038 Gm19287-201ENSMUST00000203190 358 ntBASIC11.36□□□□□ -0.59
Cdh4P39038 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Cdh4P39038 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh4P39038 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.36□□□□□ -0.59
Cdh4P39038 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.36□□□□□ -0.59
Cdh4P39038 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh4P39038 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh4P39038 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Cdh4P39038 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Cdh4P39038 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Cdh4P39038 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.36□□□□□ -0.59
Cdh4P39038 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh4P39038 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cdh4P39038 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh4P39038 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh4P39038 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh4P39038 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Cdh4P39038 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh4P39038 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh4P39038 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh4P39038 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh4P39038 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh4P39038 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh4P39038 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh4P39038 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh4P39038 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh4P39038 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh4P39038 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cdh4P39038 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.35□□□□□ -0.59
Cdh4P39038 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cdh4P39038 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cdh4P39038 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Cdh4P39038 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cdh4P39038 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.35□□□□□ -0.59
Cdh4P39038 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh4P39038 Mir6927-201ENSMUST00000184494 71 ntBASIC11.35□□□□□ -0.59
Cdh4P39038 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh4P39038 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh4P39038 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cdh4P39038 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.35□□□□□ -0.59
Cdh4P39038 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.35□□□□□ -0.59
Cdh4P39038 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.35□□□□□ -0.59
Cdh4P39038 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh4P39038 Gm807-202ENSMUST00000224929 408 ntBASIC11.35□□□□□ -0.59
Cdh4P39038 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh4P39038 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cdh4P39038 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh4P39038 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh4P39038 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh4P39038 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh4P39038 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh4P39038 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh4P39038 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh4P39038 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.35□□□□□ -0.59
Cdh4P39038 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms