Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp4P35123 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp4P35123 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.42□□□□□ -0.42
Usp4P35123 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Usp4P35123 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp4P35123 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp4P35123 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Usp4P35123 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.42□□□□□ -0.42
Usp4P35123 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.42□□□□□ -0.42
Usp4P35123 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Usp4P35123 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.42□□□□□ -0.42
Usp4P35123 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.42□□□□□ -0.42
Usp4P35123 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usp4P35123 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp4P35123 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usp4P35123 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp4P35123 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp4P35123 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp4P35123 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp4P35123 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usp4P35123 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.42□□□□□ -0.42
Usp4P35123 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp4P35123 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp4P35123 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Usp4P35123 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.41□□□□□ -0.42
Usp4P35123 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp4P35123 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp4P35123 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp4P35123 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.41□□□□□ -0.42
Usp4P35123 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Usp4P35123 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
Usp4P35123 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp4P35123 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp4P35123 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp4P35123 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.41□□□□□ -0.42
Usp4P35123 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp4P35123 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.41□□□□□ -0.42
Usp4P35123 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Usp4P35123 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Usp4P35123 Gm37444-201ENSMUST00000193605 439 ntBASIC12.41□□□□□ -0.42
Usp4P35123 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Usp4P35123 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.41□□□□□ -0.42
Usp4P35123 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Usp4P35123 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.41□□□□□ -0.42
Usp4P35123 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.41□□□□□ -0.42
Usp4P35123 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.41□□□□□ -0.42
Usp4P35123 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp4P35123 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp4P35123 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp4P35123 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Usp4P35123 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp4P35123 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Usp4P35123 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp4P35123 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Usp4P35123 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Usp4P35123 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Usp4P35123 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp4P35123 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.41□□□□□ -0.42
Usp4P35123 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp4P35123 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Usp4P35123 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Usp4P35123 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Usp4P35123 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp4P35123 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp4P35123 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Usp4P35123 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Usp4P35123 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp4P35123 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp4P35123 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp4P35123 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp4P35123 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp4P35123 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp4P35123 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp4P35123 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.4□□□□□ -0.42
Usp4P35123 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp4P35123 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp4P35123 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp4P35123 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.4□□□□□ -0.42
Usp4P35123 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp4P35123 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp4P35123 Gm42937-201ENSMUST00000197360 752 ntBASIC12.4□□□□□ -0.42
Usp4P35123 Gm43002-201ENSMUST00000200310 155 ntBASIC12.4□□□□□ -0.42
Usp4P35123 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp4P35123 Gm5904-201ENSMUST00000210286 865 ntBASIC12.4□□□□□ -0.42
Usp4P35123 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp4P35123 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp4P35123 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp4P35123 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Usp4P35123 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Usp4P35123 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp4P35123 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp4P35123 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp4P35123 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Usp4P35123 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp4P35123 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.4□□□□□ -0.42
Usp4P35123 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.4□□□□□ -0.42
Usp4P35123 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp4P35123 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Usp4P35123 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Usp4P35123 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms