Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Mmp13P33435 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mmp13P33435 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mmp13P33435 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mmp13P33435 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.12□□□□□ -0.47
Mmp13P33435 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Mmp13P33435 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Mmp13P33435 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Mmp13P33435 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Mmp13P33435 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Mmp13P33435 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Mmp13P33435 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.11□□□□□ -0.47
Mmp13P33435 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Mmp13P33435 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.11□□□□□ -0.47
Mmp13P33435 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.11□□□□□ -0.47
Mmp13P33435 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Mmp13P33435 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Mmp13P33435 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Mmp13P33435 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Mmp13P33435 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Mmp13P33435 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Mmp13P33435 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Mmp13P33435 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
Mmp13P33435 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Mmp13P33435 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.11□□□□□ -0.47
Mmp13P33435 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.11□□□□□ -0.47
Mmp13P33435 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Mmp13P33435 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Mmp13P33435 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Mmp13P33435 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Mmp13P33435 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.11□□□□□ -0.47
Mmp13P33435 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.11□□□□□ -0.47
Mmp13P33435 Gm25890-201ENSMUST00000177643 165 ntBASIC12.11□□□□□ -0.47
Mmp13P33435 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.11□□□□□ -0.47
Mmp13P33435 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.11□□□□□ -0.47
Mmp13P33435 Gm22614-201ENSMUST00000178300 165 ntBASIC12.11□□□□□ -0.47
Mmp13P33435 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.11□□□□□ -0.47
Mmp13P33435 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Mmp13P33435 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.11□□□□□ -0.47
Mmp13P33435 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Mmp13P33435 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Mmp13P33435 Gm22042-201ENSMUST00000082989 165 ntBASIC12.11□□□□□ -0.47
Mmp13P33435 Gm26110-201ENSMUST00000083971 165 ntBASIC12.11□□□□□ -0.47
Mmp13P33435 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Mmp13P33435 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Mmp13P33435 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Mmp13P33435 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Mmp13P33435 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Mmp13P33435 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Mmp13P33435 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Mmp13P33435 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.11□□□□□ -0.47
Mmp13P33435 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Mmp13P33435 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.11□□□□□ -0.47
Mmp13P33435 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.11□□□□□ -0.47
Mmp13P33435 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Mmp13P33435 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Mmp13P33435 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Mmp13P33435 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Mmp13P33435 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Mmp13P33435 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Mmp13P33435 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Mmp13P33435 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Mmp13P33435 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.1□□□□□ -0.47
Mmp13P33435 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.1□□□□□ -0.47
Mmp13P33435 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Mmp13P33435 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Mmp13P33435 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Mmp13P33435 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Mmp13P33435 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.1□□□□□ -0.47
Mmp13P33435 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Mmp13P33435 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Mmp13P33435 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Mmp13P33435 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Mmp13P33435 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Mmp13P33435 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Mmp13P33435 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Mmp13P33435 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.1□□□□□ -0.47
Mmp13P33435 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Mmp13P33435 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.1□□□□□ -0.47
Mmp13P33435 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Mmp13P33435 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.1□□□□□ -0.47
Mmp13P33435 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Mmp13P33435 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Mmp13P33435 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.1□□□□□ -0.47
Mmp13P33435 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Mmp13P33435 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Mmp13P33435 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.1□□□□□ -0.47
Mmp13P33435 Gm13097-201ENSMUST00000210722 397 ntBASIC12.1□□□□□ -0.47
Mmp13P33435 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.1□□□□□ -0.47
Mmp13P33435 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.1□□□□□ -0.47
Mmp13P33435 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.1□□□□□ -0.47
Mmp13P33435 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.1□□□□□ -0.47
Mmp13P33435 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Mmp13P33435 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Mmp13P33435 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Mmp13P33435 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.1□□□□□ -0.47
Mmp13P33435 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Mmp13P33435 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.1□□□□□ -0.47
Mmp13P33435 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Mmp13P33435 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms