Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rom1P32958 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rom1P32958 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rom1P32958 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rom1P32958 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC9.35□□□□□ -0.91
Rom1P32958 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rom1P32958 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rom1P32958 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Rom1P32958 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Rom1P32958 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Rom1P32958 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Rom1P32958 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC9.34□□□□□ -0.91
Rom1P32958 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Rom1P32958 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Rom1P32958 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Rom1P32958 Gm45206-201ENSMUST00000206885 2285 ntBASIC9.34□□□□□ -0.91
Rom1P32958 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC9.34□□□□□ -0.91
Rom1P32958 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC9.34□□□□□ -0.91
Rom1P32958 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Rom1P32958 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Rom1P32958 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Rom1P32958 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Rom1P32958 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Rom1P32958 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Rom1P32958 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Rom1P32958 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Rom1P32958 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Rom1P32958 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Rom1P32958 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Rom1P32958 Mup-ps23-201ENSMUST00000118063 630 ntBASIC9.34□□□□□ -0.91
Rom1P32958 Gm12502-201ENSMUST00000120197 444 ntBASIC9.34□□□□□ -0.91
Rom1P32958 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Rom1P32958 Rprl1-201ENSMUST00000158050 327 ntBASIC9.34□□□□□ -0.91
Rom1P32958 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Rom1P32958 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Rom1P32958 Gm26927-201ENSMUST00000182385 965 ntBASIC9.34□□□□□ -0.91
Rom1P32958 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Rom1P32958 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Rom1P32958 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Rom1P32958 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Rom1P32958 Gm18584-201ENSMUST00000203098 964 ntBASIC9.34□□□□□ -0.91
Rom1P32958 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Rom1P32958 Gm29705-201ENSMUST00000212598 474 ntBASIC9.34□□□□□ -0.91
Rom1P32958 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC9.34□□□□□ -0.91
Rom1P32958 AC110817.1-201ENSMUST00000225706 605 ntBASIC9.34□□□□□ -0.91
Rom1P32958 AC022775.2-201ENSMUST00000227885 646 ntBASIC9.34□□□□□ -0.91
Rom1P32958 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Rom1P32958 Gm10012-201ENSMUST00000078252 192 ntBASIC9.34□□□□□ -0.91
Rom1P32958 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC9.34□□□□□ -0.91
Rom1P32958 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Rom1P32958 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC9.34□□□□□ -0.91
Rom1P32958 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Rom1P32958 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Rom1P32958 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Rom1P32958 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Rom1P32958 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC9.34□□□□□ -0.91
Rom1P32958 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Rom1P32958 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Rom1P32958 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Rom1P32958 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Rom1P32958 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Rom1P32958 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Rom1P32958 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC9.34□□□□□ -0.91
Rom1P32958 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Rom1P32958 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Rom1P32958 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.92
Rom1P32958 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.92
Rom1P32958 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC9.33□□□□□ -0.92
Rom1P32958 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC9.33□□□□□ -0.92
Rom1P32958 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Gm15991-202ENSMUST00000212123 3565 ntBASIC9.33□□□□□ -0.92
Rom1P32958 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC9.33□□□□□ -0.92
Rom1P32958 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC9.33□□□□□ -0.92
Rom1P32958 Gm5912-201ENSMUST00000122282 1438 ntBASIC9.33□□□□□ -0.92
Rom1P32958 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Rom1P32958 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC9.33□□□□□ -0.92
Rom1P32958 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC9.33□□□□□ -0.92
Rom1P32958 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Gm12859-201ENSMUST00000117834 427 ntBASIC9.33□□□□□ -0.92
Rom1P32958 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Rom1P32958 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC9.33□□□□□ -0.92
Rom1P32958 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms