Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vcam1P29533 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vcam1P29533 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vcam1P29533 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vcam1P29533 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vcam1P29533 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vcam1P29533 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Vcam1P29533 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC13.56□□□□□ -0.24
Vcam1P29533 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vcam1P29533 Gm24398-201ENSMUST00000157870 109 ntBASIC13.56□□□□□ -0.24
Vcam1P29533 Gm7741-201ENSMUST00000181445 989 ntBASIC13.56□□□□□ -0.24
Vcam1P29533 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC13.56□□□□□ -0.24
Vcam1P29533 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC13.56□□□□□ -0.24
Vcam1P29533 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC13.56□□□□□ -0.24
Vcam1P29533 Gm23680-201ENSMUST00000083162 164 ntBASIC13.56□□□□□ -0.24
Vcam1P29533 Gm37859-201ENSMUST00000195529 2173 ntBASIC13.56□□□□□ -0.24
Vcam1P29533 Gm43773-201ENSMUST00000198548 2162 ntBASIC13.56□□□□□ -0.24
Vcam1P29533 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vcam1P29533 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Vcam1P29533 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vcam1P29533 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Vcam1P29533 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC13.56□□□□□ -0.24
Vcam1P29533 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vcam1P29533 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC13.56□□□□□ -0.24
Vcam1P29533 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Vcam1P29533 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.55□□□□□ -0.24
Vcam1P29533 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vcam1P29533 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vcam1P29533 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vcam1P29533 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vcam1P29533 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vcam1P29533 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vcam1P29533 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vcam1P29533 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vcam1P29533 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vcam1P29533 Gm13668-201ENSMUST00000119237 1001 ntBASIC13.55□□□□□ -0.24
Vcam1P29533 Gm15374-201ENSMUST00000119313 844 ntBASIC13.55□□□□□ -0.24
Vcam1P29533 Gm15549-201ENSMUST00000121595 622 ntBASIC13.55□□□□□ -0.24
Vcam1P29533 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vcam1P29533 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC13.55□□□□□ -0.24
Vcam1P29533 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vcam1P29533 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vcam1P29533 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vcam1P29533 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC13.55□□□□□ -0.24
Vcam1P29533 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC13.55□□□□□ -0.24
Vcam1P29533 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vcam1P29533 Gm3793-201ENSMUST00000204973 672 ntBASIC13.55□□□□□ -0.24
Vcam1P29533 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC13.55□□□□□ -0.24
Vcam1P29533 AC136376.2-201ENSMUST00000228819 490 ntBASIC13.55□□□□□ -0.24
Vcam1P29533 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vcam1P29533 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vcam1P29533 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vcam1P29533 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Vcam1P29533 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Vcam1P29533 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vcam1P29533 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Vcam1P29533 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Vcam1P29533 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vcam1P29533 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC13.55□□□□□ -0.24
Vcam1P29533 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vcam1P29533 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Vcam1P29533 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Vcam1P29533 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.55□□□□□ -0.24
Vcam1P29533 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vcam1P29533 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vcam1P29533 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Vcam1P29533 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Vcam1P29533 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vcam1P29533 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vcam1P29533 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vcam1P29533 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vcam1P29533 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.54□□□□□ -0.24
Vcam1P29533 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vcam1P29533 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Vcam1P29533 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vcam1P29533 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vcam1P29533 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Vcam1P29533 Gm37600-201ENSMUST00000193764 3292 ntBASIC13.54□□□□□ -0.24
Vcam1P29533 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Vcam1P29533 Gm4294-201ENSMUST00000105169 614 ntBASIC13.54□□□□□ -0.24
Vcam1P29533 Gm14395-201ENSMUST00000120494 563 ntBASIC13.54□□□□□ -0.24
Vcam1P29533 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC13.54□□□□□ -0.24
Vcam1P29533 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC13.54□□□□□ -0.24
Vcam1P29533 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.54□□□□□ -0.24
Vcam1P29533 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC13.54□□□□□ -0.24
Vcam1P29533 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vcam1P29533 Mir6407-201ENSMUST00000184510 101 ntBASIC13.54□□□□□ -0.24
Vcam1P29533 Gm5996-201ENSMUST00000211110 718 ntBASIC13.54□□□□□ -0.24
Vcam1P29533 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Vcam1P29533 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vcam1P29533 Gm3028-201ENSMUST00000213805 1119 ntBASIC13.54□□□□□ -0.24
Vcam1P29533 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vcam1P29533 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vcam1P29533 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vcam1P29533 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vcam1P29533 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC13.54□□□□□ -0.24
Vcam1P29533 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vcam1P29533 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vcam1P29533 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vcam1P29533 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms