Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC13.27□□□□□ -0.29
Col2a1P28481 Gm15617-201ENSMUST00000118973 771 ntBASIC13.27□□□□□ -0.29
Col2a1P28481 Gm11675-201ENSMUST00000121873 832 ntBASIC13.27□□□□□ -0.29
Col2a1P28481 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC13.27□□□□□ -0.29
Col2a1P28481 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col2a1P28481 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Col2a1P28481 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC13.27□□□□□ -0.29
Col2a1P28481 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC13.27□□□□□ -0.29
Col2a1P28481 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Col2a1P28481 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC13.27□□□□□ -0.29
Col2a1P28481 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Col2a1P28481 Gm45758-201ENSMUST00000212448 1006 ntBASIC13.27□□□□□ -0.29
Col2a1P28481 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC13.27□□□□□ -0.29
Col2a1P28481 Gm18968-201ENSMUST00000221319 862 ntBASIC13.27□□□□□ -0.29
Col2a1P28481 AC159002.1-201ENSMUST00000226714 924 ntBASIC13.27□□□□□ -0.29
Col2a1P28481 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col2a1P28481 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col2a1P28481 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Col2a1P28481 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col2a1P28481 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Col2a1P28481 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col2a1P28481 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col2a1P28481 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col2a1P28481 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col2a1P28481 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col2a1P28481 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Col2a1P28481 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col2a1P28481 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col2a1P28481 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col2a1P28481 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col2a1P28481 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC13.26□□□□□ -0.29
Col2a1P28481 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.26□□□□□ -0.29
Col2a1P28481 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col2a1P28481 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Col2a1P28481 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col2a1P28481 Gm21759-201ENSMUST00000178345 1828 ntBASIC13.26□□□□□ -0.29
Col2a1P28481 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col2a1P28481 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Col2a1P28481 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col2a1P28481 Gm5740-201ENSMUST00000211003 1857 ntBASIC13.26□□□□□ -0.29
Col2a1P28481 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Col2a1P28481 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col2a1P28481 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC13.26□□□□□ -0.29
Col2a1P28481 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC13.26□□□□□ -0.29
Col2a1P28481 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC13.26□□□□□ -0.29
Col2a1P28481 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC13.26□□□□□ -0.29
Col2a1P28481 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC13.26□□□□□ -0.29
Col2a1P28481 Gm6771-201ENSMUST00000182716 1001 ntBASIC13.26□□□□□ -0.29
Col2a1P28481 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Col2a1P28481 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col2a1P28481 Gm42867-201ENSMUST00000202995 469 ntBASIC13.26□□□□□ -0.29
Col2a1P28481 AC129308.3-201ENSMUST00000225652 524 ntBASIC13.26□□□□□ -0.29
Col2a1P28481 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col2a1P28481 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col2a1P28481 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col2a1P28481 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col2a1P28481 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Col2a1P28481 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col2a1P28481 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.26□□□□□ -0.29
Col2a1P28481 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col2a1P28481 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col2a1P28481 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col2a1P28481 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC13.26□□□□□ -0.29
Col2a1P28481 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col2a1P28481 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col2a1P28481 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col2a1P28481 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col2a1P28481 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col2a1P28481 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col2a1P28481 AC167022.1-201ENSMUST00000218647 1458 ntBASIC13.26□□□□□ -0.29
Col2a1P28481 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col2a1P28481 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col2a1P28481 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col2a1P28481 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col2a1P28481 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col2a1P28481 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col2a1P28481 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col2a1P28481 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col2a1P28481 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Col2a1P28481 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col2a1P28481 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC13.25□□□□□ -0.29
Col2a1P28481 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC13.25□□□□□ -0.29
Col2a1P28481 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Col2a1P28481 Gm12194-201ENSMUST00000117756 1012 ntBASIC13.25□□□□□ -0.29
Col2a1P28481 Gm16397-201ENSMUST00000122201 494 ntBASIC13.25□□□□□ -0.29
Col2a1P28481 Gm44323-201ENSMUST00000198689 129 ntBASIC13.25□□□□□ -0.29
Col2a1P28481 Gm45120-201ENSMUST00000208880 408 ntBASIC13.25□□□□□ -0.29
Col2a1P28481 Mt1-202ENSMUST00000211807 1085 ntBASIC13.25□□□□□ -0.29
Col2a1P28481 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC13.25□□□□□ -0.29
Col2a1P28481 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col2a1P28481 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col2a1P28481 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col2a1P28481 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Col2a1P28481 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col2a1P28481 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col2a1P28481 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col2a1P28481 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col2a1P28481 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col2a1P28481 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col2a1P28481 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms