Protein–RNA interactions for Protein: P28235

Gja4, Gap junction alpha-4 protein, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja4P28235 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gja4P28235 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gja4P28235 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Gja4P28235 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Gja4P28235 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gja4P28235 Gm15615-201ENSMUST00000118876 198 ntBASIC11.83□□□□□ -0.52
Gja4P28235 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.83□□□□□ -0.52
Gja4P28235 Gm11244-201ENSMUST00000121243 237 ntBASIC11.83□□□□□ -0.52
Gja4P28235 Gm14441-201ENSMUST00000121960 540 ntBASIC11.83□□□□□ -0.52
Gja4P28235 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Gja4P28235 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Gja4P28235 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gja4P28235 Gm6114-201ENSMUST00000182472 968 ntBASIC11.83□□□□□ -0.52
Gja4P28235 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.83□□□□□ -0.52
Gja4P28235 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gja4P28235 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gja4P28235 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gja4P28235 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.83□□□□□ -0.52
Gja4P28235 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC11.83□□□□□ -0.52
Gja4P28235 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.83□□□□□ -0.52
Gja4P28235 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.83□□□□□ -0.52
Gja4P28235 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC11.83□□□□□ -0.52
Gja4P28235 AC136376.2-201ENSMUST00000228819 490 ntBASIC11.83□□□□□ -0.52
Gja4P28235 Gm23680-201ENSMUST00000083162 164 ntBASIC11.83□□□□□ -0.52
Gja4P28235 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gja4P28235 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gja4P28235 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Gja4P28235 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gja4P28235 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gja4P28235 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Gja4P28235 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.83□□□□□ -0.52
Gja4P28235 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gja4P28235 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gja4P28235 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gja4P28235 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gja4P28235 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.83□□□□□ -0.52
Gja4P28235 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gja4P28235 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gja4P28235 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gja4P28235 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Gja4P28235 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gja4P28235 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gja4P28235 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.82□□□□□ -0.52
Gja4P28235 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Gja4P28235 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gja4P28235 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gja4P28235 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gja4P28235 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gja4P28235 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.82□□□□□ -0.52
Gja4P28235 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gja4P28235 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gja4P28235 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gja4P28235 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Gja4P28235 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gja4P28235 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Gja4P28235 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC11.82□□□□□ -0.52
Gja4P28235 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gja4P28235 Gm15744-201ENSMUST00000161734 213 ntBASIC11.82□□□□□ -0.52
Gja4P28235 Gm6771-201ENSMUST00000182716 1001 ntBASIC11.82□□□□□ -0.52
Gja4P28235 Gm5100-201ENSMUST00000195631 589 ntBASIC11.82□□□□□ -0.52
Gja4P28235 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
Gja4P28235 Gm5982-201ENSMUST00000196234 512 ntBASIC11.82□□□□□ -0.52
Gja4P28235 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC11.82□□□□□ -0.52
Gja4P28235 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gja4P28235 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gja4P28235 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.82□□□□□ -0.52
Gja4P28235 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gja4P28235 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.82□□□□□ -0.52
Gja4P28235 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Gja4P28235 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gja4P28235 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gja4P28235 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Gja4P28235 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gja4P28235 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gja4P28235 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gja4P28235 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gja4P28235 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Gja4P28235 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gja4P28235 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Gja4P28235 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Gja4P28235 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gja4P28235 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gja4P28235 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.81□□□□□ -0.52
Gja4P28235 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.81□□□□□ -0.52
Gja4P28235 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gja4P28235 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gja4P28235 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gja4P28235 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gja4P28235 Gm25766-201ENSMUST00000104101 131 ntBASIC11.81□□□□□ -0.52
Gja4P28235 Gm25880-201ENSMUST00000104331 132 ntBASIC11.81□□□□□ -0.52
Gja4P28235 Gm11340-201ENSMUST00000119226 412 ntBASIC11.81□□□□□ -0.52
Gja4P28235 Gm12628-201ENSMUST00000122193 382 ntBASIC11.81□□□□□ -0.52
Gja4P28235 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.81□□□□□ -0.52
Gja4P28235 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.81□□□□□ -0.52
Gja4P28235 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.81□□□□□ -0.52
Gja4P28235 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gja4P28235 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC11.81□□□□□ -0.52
Gja4P28235 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gja4P28235 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.81□□□□□ -0.52
Gja4P28235 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms