Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd40lgP27548 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd40lgP27548 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd40lgP27548 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cd40lgP27548 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd40lgP27548 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd40lgP27548 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Cd40lgP27548 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cd40lgP27548 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd40lgP27548 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.99□□□□□ -0.65
Cd40lgP27548 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd40lgP27548 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd40lgP27548 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd40lgP27548 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cd40lgP27548 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd40lgP27548 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd40lgP27548 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd40lgP27548 Gm15236-201ENSMUST00000117309 379 ntBASIC10.99□□□□□ -0.65
Cd40lgP27548 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cd40lgP27548 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC10.99□□□□□ -0.65
Cd40lgP27548 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cd40lgP27548 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.99□□□□□ -0.65
Cd40lgP27548 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.99□□□□□ -0.65
Cd40lgP27548 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.99□□□□□ -0.65
Cd40lgP27548 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd40lgP27548 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Cd40lgP27548 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd40lgP27548 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
Cd40lgP27548 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd40lgP27548 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.99□□□□□ -0.65
Cd40lgP27548 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cd40lgP27548 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Cd40lgP27548 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cd40lgP27548 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd40lgP27548 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd40lgP27548 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cd40lgP27548 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd40lgP27548 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cd40lgP27548 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Cd40lgP27548 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd40lgP27548 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cd40lgP27548 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cd40lgP27548 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cd40lgP27548 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cd40lgP27548 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cd40lgP27548 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cd40lgP27548 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cd40lgP27548 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cd40lgP27548 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Cd40lgP27548 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cd40lgP27548 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cd40lgP27548 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cd40lgP27548 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cd40lgP27548 Gm14644-201ENSMUST00000116671 647 ntBASIC10.98□□□□□ -0.65
Cd40lgP27548 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cd40lgP27548 Gm29615-201ENSMUST00000185371 697 ntBASIC10.98□□□□□ -0.65
Cd40lgP27548 Gm28224-201ENSMUST00000186078 697 ntBASIC10.98□□□□□ -0.65
Cd40lgP27548 Gm29001-201ENSMUST00000186177 697 ntBASIC10.98□□□□□ -0.65
Cd40lgP27548 Gm28292-201ENSMUST00000186593 697 ntBASIC10.98□□□□□ -0.65
Cd40lgP27548 Gm28101-201ENSMUST00000187608 697 ntBASIC10.98□□□□□ -0.65
Cd40lgP27548 Gm29076-201ENSMUST00000187689 697 ntBASIC10.98□□□□□ -0.65
Cd40lgP27548 Gm28302-201ENSMUST00000187931 697 ntBASIC10.98□□□□□ -0.65
Cd40lgP27548 Gm28646-201ENSMUST00000188220 697 ntBASIC10.98□□□□□ -0.65
Cd40lgP27548 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cd40lgP27548 Gm28205-201ENSMUST00000189177 697 ntBASIC10.98□□□□□ -0.65
Cd40lgP27548 Gm29032-201ENSMUST00000189797 697 ntBASIC10.98□□□□□ -0.65
Cd40lgP27548 Gm28695-201ENSMUST00000190300 697 ntBASIC10.98□□□□□ -0.65
Cd40lgP27548 Gm37448-201ENSMUST00000192795 697 ntBASIC10.98□□□□□ -0.65
Cd40lgP27548 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC10.98□□□□□ -0.65
Cd40lgP27548 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cd40lgP27548 Gm5363-201ENSMUST00000211927 938 ntBASIC10.98□□□□□ -0.65
Cd40lgP27548 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cd40lgP27548 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cd40lgP27548 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Cd40lgP27548 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cd40lgP27548 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Cd40lgP27548 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cd40lgP27548 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cd40lgP27548 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Cd40lgP27548 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cd40lgP27548 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Cd40lgP27548 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cd40lgP27548 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.98□□□□□ -0.65
Cd40lgP27548 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cd40lgP27548 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cd40lgP27548 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cd40lgP27548 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Cd40lgP27548 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Cd40lgP27548 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cd40lgP27548 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cd40lgP27548 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cd40lgP27548 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Cd40lgP27548 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cd40lgP27548 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cd40lgP27548 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cd40lgP27548 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cd40lgP27548 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cd40lgP27548 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cd40lgP27548 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cd40lgP27548 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms