Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.2□□□□□ -0.46
Nfkb1P25799 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.2□□□□□ -0.46
Nfkb1P25799 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nfkb1P25799 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Nfkb1P25799 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nfkb1P25799 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nfkb1P25799 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nfkb1P25799 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.2□□□□□ -0.46
Nfkb1P25799 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nfkb1P25799 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nfkb1P25799 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Nfkb1P25799 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nfkb1P25799 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nfkb1P25799 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.2□□□□□ -0.46
Nfkb1P25799 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nfkb1P25799 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nfkb1P25799 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nfkb1P25799 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nfkb1P25799 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Nfkb1P25799 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Nfkb1P25799 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Nfkb1P25799 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nfkb1P25799 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.2□□□□□ -0.46
Nfkb1P25799 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nfkb1P25799 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nfkb1P25799 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.2□□□□□ -0.46
Nfkb1P25799 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nfkb1P25799 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nfkb1P25799 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nfkb1P25799 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nfkb1P25799 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nfkb1P25799 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nfkb1P25799 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nfkb1P25799 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nfkb1P25799 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Nfkb1P25799 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nfkb1P25799 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nfkb1P25799 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nfkb1P25799 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nfkb1P25799 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nfkb1P25799 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nfkb1P25799 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.19□□□□□ -0.46
Nfkb1P25799 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.19□□□□□ -0.46
Nfkb1P25799 Gm22144-201ENSMUST00000157402 102 ntBASIC12.19□□□□□ -0.46
Nfkb1P25799 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.19□□□□□ -0.46
Nfkb1P25799 Gm17391-201ENSMUST00000171036 126 ntBASIC12.19□□□□□ -0.46
Nfkb1P25799 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.19□□□□□ -0.46
Nfkb1P25799 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nfkb1P25799 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.19□□□□□ -0.46
Nfkb1P25799 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.19□□□□□ -0.46
Nfkb1P25799 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.19□□□□□ -0.46
Nfkb1P25799 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.19□□□□□ -0.46
Nfkb1P25799 Gm38117-201ENSMUST00000194653 939 ntBASIC12.19□□□□□ -0.46
Nfkb1P25799 Gm5714-201ENSMUST00000197343 566 ntBASIC12.19□□□□□ -0.46
Nfkb1P25799 Gm2553-201ENSMUST00000215986 605 ntBASIC12.19□□□□□ -0.46
Nfkb1P25799 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.19□□□□□ -0.46
Nfkb1P25799 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.19□□□□□ -0.46
Nfkb1P25799 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nfkb1P25799 Gm10179-201ENSMUST00000086233 688 ntBASIC12.19□□□□□ -0.46
Nfkb1P25799 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nfkb1P25799 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nfkb1P25799 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nfkb1P25799 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.19□□□□□ -0.46
Nfkb1P25799 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nfkb1P25799 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Nfkb1P25799 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nfkb1P25799 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nfkb1P25799 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nfkb1P25799 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Nfkb1P25799 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nfkb1P25799 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.19□□□□□ -0.46
Nfkb1P25799 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nfkb1P25799 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nfkb1P25799 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Nfkb1P25799 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nfkb1P25799 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Nfkb1P25799 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nfkb1P25799 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nfkb1P25799 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nfkb1P25799 Map1b-203ENSMUST00000223725 2669 ntBASIC12.18□□□□□ -0.46
Nfkb1P25799 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nfkb1P25799 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nfkb1P25799 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Nfkb1P25799 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Nfkb1P25799 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nfkb1P25799 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.18□□□□□ -0.46
Nfkb1P25799 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nfkb1P25799 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Nfkb1P25799 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nfkb1P25799 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Nfkb1P25799 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.18□□□□□ -0.46
Nfkb1P25799 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nfkb1P25799 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Nfkb1P25799 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Nfkb1P25799 Gm27390-201ENSMUST00000184516 176 ntBASIC12.18□□□□□ -0.46
Nfkb1P25799 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.18□□□□□ -0.46
Nfkb1P25799 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nfkb1P25799 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.18□□□□□ -0.46
Nfkb1P25799 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nfkb1P25799 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms