Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col8a2P25318 AC130671.2-201ENSMUST00000227224 1621 ntBASIC9.88□□□□□ -0.83
Col8a2P25318 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Col8a2P25318 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col8a2P25318 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col8a2P25318 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Col8a2P25318 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Col8a2P25318 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col8a2P25318 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Col8a2P25318 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC9.88□□□□□ -0.83
Col8a2P25318 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col8a2P25318 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col8a2P25318 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col8a2P25318 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC9.88□□□□□ -0.83
Col8a2P25318 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC9.88□□□□□ -0.83
Col8a2P25318 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col8a2P25318 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Col8a2P25318 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a2P25318 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Col8a2P25318 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a2P25318 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
Col8a2P25318 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC9.87□□□□□ -0.83
Col8a2P25318 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC9.87□□□□□ -0.83
Col8a2P25318 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a2P25318 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC9.87□□□□□ -0.83
Col8a2P25318 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Col8a2P25318 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a2P25318 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a2P25318 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a2P25318 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a2P25318 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a2P25318 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a2P25318 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a2P25318 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Col8a2P25318 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC9.87□□□□□ -0.83
Col8a2P25318 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a2P25318 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC9.87□□□□□ -0.83
Col8a2P25318 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a2P25318 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC9.87□□□□□ -0.83
Col8a2P25318 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a2P25318 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC9.87□□□□□ -0.83
Col8a2P25318 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a2P25318 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC9.87□□□□□ -0.83
Col8a2P25318 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a2P25318 Gm10731-201ENSMUST00000181171 448 ntBASIC9.87□□□□□ -0.83
Col8a2P25318 Gm38117-201ENSMUST00000194653 939 ntBASIC9.87□□□□□ -0.83
Col8a2P25318 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC9.87□□□□□ -0.83
Col8a2P25318 Gm43378-201ENSMUST00000199336 582 ntBASIC9.87□□□□□ -0.83
Col8a2P25318 Mir7686-201ENSMUST00000200604 57 ntBASIC9.87□□□□□ -0.83
Col8a2P25318 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a2P25318 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Col8a2P25318 Gm4797-201ENSMUST00000219075 1283 ntBASIC9.87□□□□□ -0.83
Col8a2P25318 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a2P25318 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
Col8a2P25318 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a2P25318 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a2P25318 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a2P25318 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a2P25318 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a2P25318 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a2P25318 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a2P25318 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a2P25318 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a2P25318 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Col8a2P25318 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
Col8a2P25318 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a2P25318 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC9.87□□□□□ -0.83
Col8a2P25318 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a2P25318 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Col8a2P25318 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a2P25318 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a2P25318 Gm18986-201ENSMUST00000216029 1986 ntBASIC9.86□□□□□ -0.83
Col8a2P25318 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a2P25318 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC9.86□□□□□ -0.83
Col8a2P25318 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC9.86□□□□□ -0.83
Col8a2P25318 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a2P25318 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a2P25318 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a2P25318 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a2P25318 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a2P25318 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a2P25318 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Col8a2P25318 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a2P25318 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a2P25318 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a2P25318 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a2P25318 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a2P25318 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Col8a2P25318 Gm13809-201ENSMUST00000117921 597 ntBASIC9.86□□□□□ -0.83
Col8a2P25318 Gm14724-201ENSMUST00000118400 537 ntBASIC9.86□□□□□ -0.83
Col8a2P25318 Gm12201-201ENSMUST00000120657 1234 ntBASIC9.86□□□□□ -0.83
Col8a2P25318 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a2P25318 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a2P25318 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC9.86□□□□□ -0.83
Col8a2P25318 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Col8a2P25318 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a2P25318 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col8a2P25318 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC9.86□□□□□ -0.83
Col8a2P25318 AC153929.1-201ENSMUST00000219009 303 ntBASIC9.86□□□□□ -0.83
Col8a2P25318 CT009718.3-201ENSMUST00000221116 367 ntBASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 109.6 ms