Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.16□□□□□ -0.62
Clk1P22518 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Clk1P22518 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Clk1P22518 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.16□□□□□ -0.62
Clk1P22518 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Clk1P22518 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Clk1P22518 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Clk1P22518 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Clk1P22518 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clk1P22518 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clk1P22518 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Clk1P22518 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Clk1P22518 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.15□□□□□ -0.62
Clk1P22518 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Clk1P22518 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Clk1P22518 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Clk1P22518 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.15□□□□□ -0.62
Clk1P22518 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC11.15□□□□□ -0.62
Clk1P22518 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.15□□□□□ -0.62
Clk1P22518 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.15□□□□□ -0.62
Clk1P22518 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.15□□□□□ -0.62
Clk1P22518 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Clk1P22518 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.15□□□□□ -0.62
Clk1P22518 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Clk1P22518 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Clk1P22518 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Clk1P22518 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Clk1P22518 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.15□□□□□ -0.62
Clk1P22518 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.15□□□□□ -0.62
Clk1P22518 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.15□□□□□ -0.62
Clk1P22518 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Clk1P22518 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Clk1P22518 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Clk1P22518 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Clk1P22518 Gm14832-201ENSMUST00000121289 322 ntBASIC11.15□□□□□ -0.62
Clk1P22518 Gm15547-201ENSMUST00000122152 333 ntBASIC11.15□□□□□ -0.62
Clk1P22518 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Clk1P22518 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Clk1P22518 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.15□□□□□ -0.62
Clk1P22518 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Clk1P22518 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Clk1P22518 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.15□□□□□ -0.62
Clk1P22518 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.15□□□□□ -0.62
Clk1P22518 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.15□□□□□ -0.62
Clk1P22518 Gm42937-201ENSMUST00000197360 752 ntBASIC11.15□□□□□ -0.62
Clk1P22518 Gm30285-201ENSMUST00000214614 422 ntBASIC11.15□□□□□ -0.62
Clk1P22518 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.15□□□□□ -0.62
Clk1P22518 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Clk1P22518 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.15□□□□□ -0.62
Clk1P22518 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Clk1P22518 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Clk1P22518 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Clk1P22518 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.15□□□□□ -0.62
Clk1P22518 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Clk1P22518 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Clk1P22518 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Clk1P22518 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Clk1P22518 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Clk1P22518 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Clk1P22518 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Clk1P22518 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Clk1P22518 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Clk1P22518 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clk1P22518 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clk1P22518 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clk1P22518 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clk1P22518 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Clk1P22518 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clk1P22518 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Clk1P22518 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.14□□□□□ -0.63
Clk1P22518 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Clk1P22518 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clk1P22518 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.14□□□□□ -0.63
Clk1P22518 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clk1P22518 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clk1P22518 Gm38910-201ENSMUST00000204630 2448 ntBASIC11.14□□□□□ -0.63
Clk1P22518 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Clk1P22518 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clk1P22518 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clk1P22518 Gm11930-201ENSMUST00000117788 190 ntBASIC11.14□□□□□ -0.63
Clk1P22518 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.14□□□□□ -0.63
Clk1P22518 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.14□□□□□ -0.63
Clk1P22518 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Clk1P22518 Gm3096-201ENSMUST00000185770 364 ntBASIC11.14□□□□□ -0.63
Clk1P22518 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.14□□□□□ -0.63
Clk1P22518 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.14□□□□□ -0.63
Clk1P22518 Gm31256-201ENSMUST00000194705 506 ntBASIC11.14□□□□□ -0.63
Clk1P22518 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Clk1P22518 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clk1P22518 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.14□□□□□ -0.63
Clk1P22518 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clk1P22518 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clk1P22518 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Clk1P22518 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clk1P22518 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.14□□□□□ -0.63
Clk1P22518 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clk1P22518 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clk1P22518 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Clk1P22518 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Clk1P22518 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms