Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.32□□□□□ -0.6
Hoxb9P20615 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.32□□□□□ -0.6
Hoxb9P20615 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb9P20615 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb9P20615 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb9P20615 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb9P20615 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb9P20615 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb9P20615 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb9P20615 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb9P20615 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Hoxb9P20615 Gm23596-201ENSMUST00000104304 132 ntBASIC11.32□□□□□ -0.6
Hoxb9P20615 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb9P20615 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.32□□□□□ -0.6
Hoxb9P20615 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Hoxb9P20615 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb9P20615 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb9P20615 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb9P20615 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.32□□□□□ -0.6
Hoxb9P20615 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb9P20615 Gm3332-201ENSMUST00000189337 928 ntBASIC11.32□□□□□ -0.6
Hoxb9P20615 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.32□□□□□ -0.6
Hoxb9P20615 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb9P20615 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb9P20615 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.32□□□□□ -0.6
Hoxb9P20615 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb9P20615 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb9P20615 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb9P20615 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb9P20615 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb9P20615 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Hoxb9P20615 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.32□□□□□ -0.6
Hoxb9P20615 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb9P20615 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb9P20615 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Hoxb9P20615 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb9P20615 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb9P20615 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb9P20615 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb9P20615 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb9P20615 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb9P20615 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb9P20615 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.32□□□□□ -0.6
Hoxb9P20615 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.32□□□□□ -0.6
Hoxb9P20615 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb9P20615 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb9P20615 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb9P20615 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.32□□□□□ -0.6
Hoxb9P20615 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.31□□□□□ -0.6
Hoxb9P20615 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb9P20615 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb9P20615 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb9P20615 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb9P20615 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb9P20615 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb9P20615 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb9P20615 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb9P20615 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb9P20615 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.31□□□□□ -0.6
Hoxb9P20615 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb9P20615 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb9P20615 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Hoxb9P20615 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb9P20615 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb9P20615 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb9P20615 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Hoxb9P20615 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.31□□□□□ -0.6
Hoxb9P20615 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb9P20615 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Hoxb9P20615 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.31□□□□□ -0.6
Hoxb9P20615 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb9P20615 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb9P20615 Mir7677-201ENSMUST00000184226 67 ntBASIC11.31□□□□□ -0.6
Hoxb9P20615 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb9P20615 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.31□□□□□ -0.6
Hoxb9P20615 Mir8093-201ENSMUST00000185043 137 ntBASIC11.31□□□□□ -0.6
Hoxb9P20615 Gm28071-201ENSMUST00000190355 478 ntBASIC11.31□□□□□ -0.6
Hoxb9P20615 Gm4857-201ENSMUST00000192718 785 ntBASIC11.31□□□□□ -0.6
Hoxb9P20615 Gm2553-201ENSMUST00000215986 605 ntBASIC11.31□□□□□ -0.6
Hoxb9P20615 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Hoxb9P20615 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb9P20615 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb9P20615 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb9P20615 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb9P20615 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Hoxb9P20615 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb9P20615 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Hoxb9P20615 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb9P20615 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb9P20615 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb9P20615 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Hoxb9P20615 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb9P20615 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.31□□□□□ -0.6
Hoxb9P20615 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Hoxb9P20615 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxb9P20615 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxb9P20615 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxb9P20615 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxb9P20615 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxb9P20615 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms