Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Tnfrsf9P20334 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Tnfrsf9P20334 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Tnfrsf9P20334 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Tnfrsf9P20334 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Tnfrsf9P20334 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Tnfrsf9P20334 Gm45635-201ENSMUST00000211516 2134 ntBASIC9.97□□□□□ -0.81
Tnfrsf9P20334 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Tnfrsf9P20334 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Tnfrsf9P20334 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Tnfrsf9P20334 Gm5385-201ENSMUST00000118988 1559 ntBASIC9.97□□□□□ -0.81
Tnfrsf9P20334 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Tnfrsf9P20334 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Tnfrsf9P20334 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Tnfrsf9P20334 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Tnfrsf9P20334 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Tnfrsf9P20334 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Tnfrsf9P20334 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Tnfrsf9P20334 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Tnfrsf9P20334 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Tnfrsf9P20334 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.81
Tnfrsf9P20334 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Tnfrsf9P20334 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Tnfrsf9P20334 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Tnfrsf9P20334 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.81
Tnfrsf9P20334 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Tnfrsf9P20334 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Tnfrsf9P20334 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Tnfrsf9P20334 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Tnfrsf9P20334 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Tnfrsf9P20334 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Tnfrsf9P20334 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Tnfrsf9P20334 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC9.96□□□□□ -0.81
Tnfrsf9P20334 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Tnfrsf9P20334 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Tnfrsf9P20334 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Tnfrsf9P20334 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Tnfrsf9P20334 Snord83b-201ENSMUST00000104546 94 ntBASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Gm5133-201ENSMUST00000118940 1255 ntBASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Gm8566-201ENSMUST00000120174 465 ntBASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Gm8885-201ENSMUST00000189382 598 ntBASIC9.96□□□□□ -0.82
Tnfrsf9P20334 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Gm37845-201ENSMUST00000194977 355 ntBASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Gm44126-201ENSMUST00000204831 514 ntBASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Gm45770-201ENSMUST00000212105 616 ntBASIC9.96□□□□□ -0.82
Tnfrsf9P20334 AC123665.1-201ENSMUST00000228204 438 ntBASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Uchl4-201ENSMUST00000039011 1162 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Gm22058-201ENSMUST00000083393 310 ntBASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Gm8228-201ENSMUST00000189949 2192 ntBASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Gm8617-201ENSMUST00000118796 2222 ntBASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Gm42479-201ENSMUST00000198654 1356 ntBASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Gpm6b-208ENSMUST00000112233 2949 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Dus4l-201ENSMUST00000020977 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Tnfrsf9P20334 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Tnfrsf9P20334 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Tnfrsf9P20334 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Tnfrsf9P20334 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Tnfrsf9P20334 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC9.95□□□□□ -0.82
Tnfrsf9P20334 Gm44826-201ENSMUST00000207648 2332 ntBASIC9.95□□□□□ -0.82
Tnfrsf9P20334 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Tnfrsf9P20334 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Tnfrsf9P20334 1700001J11Rik-202ENSMUST00000190330 2463 ntBASIC9.95□□□□□ -0.82
Tnfrsf9P20334 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms